Phocoena phocoena (harbor porpoise): 136122227
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Entry
136122227 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04082
Neuroactive ligand signaling
pphc04726
Serotonergic synapse
pphc04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
136122227
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
136122227
09157 Sensory system
04742 Taste transduction
136122227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136122227
Ion channels [BR:
pphc04040
]
Ligand-gated channels
Serotonin (5-HT3)
136122227
SSDB
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
136122227
NCBI-ProteinID:
XP_065732198
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Position
4:62791219..62796692
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AA seq
444 aa
AA seq
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MEGGWPTTGEFLLCLPVSLLLQGGTNTFSINCSVFDQRSIDPAVFQAIFNQKDFRPVINY
SIPTHISISFTLSAILKVVNAQLQLMSFLWLKLIWSHPFISWDPEECGDINKLTVTAENL
WLRDIFIVESNDVDHTLDGLSACVTNEGHVVYNKPMQVTSICSLDIYFSFDQKNCTLTFS
SFLYTVENMLLGMDKEVWDITDTSRDIGHTQGEWELLGINKATPKISVGFSLFDQIMFYV
AIRHRPSLYVISSLMPSSFLITIDALSFFLPVESENHAPFKMTLLLGYNVFLLMTLNDLL
PASGTSLISVYFALCLSLMVVSLLKTIFITYLLHLATTQPPPRPRCLRSLLLHCTSPRKC
CSLXKEDVGLGLTPTHLSGQEPGELGGKELGPREAELSGASGWTRARLADLWVHFSHMMD
TLLFRIYLLFLATSITTVIILWNT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggggtggcccacgacaggggaattcctcctctgcctccctgtcagccttctg
cttcaaggagggacaaacactttcagcatcaattgttcagtctttgaccagcgcagcata
gaccctgctgtcttccaggctatatttaaccagaaggacttccgtccagtaatcaactac
agcatccccactcatatcagcatctccttcaccctgtctgccatccttaaagtggtgaat
gcacaacttcagctgatgtcatttctgtggttaaagttgatctggagtcacccattcatc
agctgggacccagaagaatgtggtgatatcaataaactcactgtgacagctgagaacctg
tggctccgagacatcttcatcgtggaatccaacgatgtggatcacactctggatggcctc
tccgcctgtgtgactaatgaaggtcatgttgtgtacaacaaaccgatgcaggtgaccagc
atctgtagcctggacatctacttctcttttgaccagaagaactgcaccctcacttttagc
tctttcctctacacagtggaaaacatgttgctgggcatggacaaggaagtgtgggacata
acagacacctcacgtgacattggccacacacaaggggagtgggagctcctgggcatcaac
aaggccaccccgaagatatctgtgggcttcagcctttttgaccagatcatgttctatgtg
gccatcaggcacaggcccagcctctacgtcataagttccctgatgcccagtagctttctg
atcaccatcgatgccctcagcttcttcctgccagtagaaagcgagaaccacgccccattc
aagatgacactcctgctgggctacaacgtcttcctgctcatgacattgaatgacttactc
cctgccagtggcacctccctcatcagtgtctacttcgccctgtgtctgtcactgatggtg
gtcagcctgctgaagaccatcttcatcacctacctgctgcacctggccaccacccagccc
ccacccaggcctcgctgcctccgttccctgcttctacactgcaccagcccaaggaaatgc
tgctctctgnngaaggaggatgtgggcctgggcctcacacccacccacctgtctggacag
gagccaggggaattgggagggaaggagctgggacccagagaggcagaactgagtggtgcc
tcaggatggacaagggcccggctagctgacctgtgggtgcatttcagccacatgatggac
accctgctcttccgcatctacctgcttttcttggccacctccatcaccacggtcatcatc
ctctggaacacctag
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