Phocoena phocoena (harbor porpoise): 136122359
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Entry
136122359 CDS
T11058
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc05016
Huntington disease
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
136122359 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
136122359 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pphc03037
]
136122359 (IFT57)
Cilium and associated proteins [BR:
pphc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
136122359 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
DUF745
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
136122359
NCBI-ProteinID:
XP_065732412
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Position
4:91183427..91243453
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AA seq
427 aa
AA seq
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MAAAVVTPSGLEDGVSRSRGEGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLRYEEDLLR
KNNLKPPSRHYFALPTNPGEQFYMFFTLAAWLINKAGRPFEQPQEYDDPNATISNILSEL
RSFGRTADFPPSKLKSGYGAHVCYVLDCLAEEALKYTGFTWKRPTYPVEELEEETVAEDD
AELTLNKVDEEFVEEETDNEENFIDLSVLKAQTYRLDMNESAKQEDILESTTDAAEWSLE
VERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGLLDKLHSEISRTLEKIGS
REKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEMEE
KGSSMTDGAPLVKIKQSLTKLKQETIQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATVIP
ESAIGSY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagtggtcacgccgtcgggtttggaggatggggtttctcggtcccgcggc
gaaggggcaggggaggtggtcgtggaacggggccccggcgcggcctaccacatgttcgtg
gtgatggaggacctggtggagaagctgaagttgctccgctatgaggaggatctcctccgg
aaaaacaacctgaagcccccgtccagacactattttgcactgcctaccaatcctggggaa
cagttctacatgtttttcactcttgctgcttggttgattaataaagcaggacgccccttt
gagcagcctcaagaatatgatgaccctaatgcaacaatctctaacatattatctgaactt
cgatcattcggtagaactgcagatttccctccttcaaaattaaaatcgggttatggagca
catgtatgctatgttcttgactgtttagccgaagaagcattaaaatatactggtttcact
tggaaaagaccaacatacccagtggaagaattagaagaagaaactgttgcagaagatgat
gcagaattaacattaaataaagtggatgaagaatttgtggaagaggagacagacaatgaa
gaaaactttattgatctcagcgttttgaaggcccagacctatcgcttggatatgaacgag
tctgccaaacaagaagatattttggaatccacaacagatgctgcggaatggagtctagaa
gtggaacgtgtactaccacaactgaaagtcacgatcaggactgacaataaggattggaga
atccatgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaaggagacc
aagggacttttggacaaacttcacagtgaaattagcaggactctagagaagattggcagc
cgagaaaagtacatcaacaatcagcttgagcacttggttcaggaatatcgtgcagctcaa
gcccagctgagtgaggcaagggagcgttaccagcagggaaacggtggagtaactgaaagg
accagactcctgtctgaggttacagaagagctagaaaaggtaaaacaagaaatggaagaa
aaaggcagcagtatgactgatggtgctcctttggtgaagattaaacagagcttaacgaag
ctgaagcaagaaactattcagatggacattagaatcggtgttgtggaacacacattactc
cagtcaaaattgaaggagaagtccaacatgaccagggacatgcatgccacagtcattcca
gaatctgcaataggctcttattaa
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