Phocoena phocoena (harbor porpoise): 136122632 Help Entry 136122632         CDS       T11058                                  Symbol COL6A6 Name (RefSeq) collagen alpha-6(VI) chain   KO K06238   collagen type VI alpha Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04151   PI3K-Akt signaling pathway pphc04510   Focal adhesion pphc04512   ECM-receptor interaction pphc04518   Integrin signaling pphc04820   Cytoskeleton in muscle cells pphc04974   Protein digestion and absorption pphc05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:pphc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     136122632 (COL6A6)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136122632 (COL6A6)    04518 Integrin signaling     136122632 (COL6A6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     136122632 (COL6A6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     136122632 (COL6A6)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     136122632 (COL6A6)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     136122632 (COL6A6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pphc04147]     136122632 (COL6A6)    00536 Glycosaminoglycan binding proteins [BR:pphc00536]     136122632 (COL6A6) Exosome [BR:pphc04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    136122632 (COL6A6) Glycosaminoglycan binding proteins [BR:pphc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136122632 (COL6A6)  Hyaluronan   Extracellular matrix or blood plasma proteins    136122632 (COL6A6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA VWA_2 VWA_3 vWA_SIBA-E Integrin_beta Motif Other DBs NCBI-GeneID:  136122632 NCBI-ProteinID:  XP_065732766 LinkDB All DBs Position 4:13090043..13200388 Genome browser AA seq 2266 aa AA seqDB search MLLTLLLMIICSHVSVNQHSGPEYADVVFLVDSSDHMGIKSFPFVKTFINKMITSLPIEA HKYRVGLAQYSDGLHREFQLSTFKSRGPMLNHLKKNFRFLGGSLRIGKTLQEVHTTYFSN GRDRRQFPPILVVLASAESEDAVEEASKALRNDGVRIISVGMQGASEETLKAMATGQFHY SLRTVRDLSTFSQNMTQILKDAAQYKEGAVNDILVEVCQGPSVADVVFLLDMSISGSWED FDYLKEFLEESVSALDIKENCMRVGLVAYSNETKVINPLSSGINKSEVLQDIQSLSPQAG KAYTGAALRKIRKEVFSVQHGSRKNQGVPQIAVLVTHSPSEDNVTKAAVNLRRQGVTIFT MGIDGASDAQLEKIASHPAKQYISKLKTFSDLAAHNQTFLKKLRNQITHTVSVISERTET LKSGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVVGMFNIAPQKVRVGAVQYADHW DLEFEISKYTNKHDVGKAIENIRQLGGNTNTGAALNFTLGLLQKAKRQRENRVPSHLVVL TNGVSQDSILGPANRLREELIHVYAIGVKEANETQLREIAGEEKRVYYVRDFDALKDIRN QVVQEICAEEACKEMKADIMFLVDSSGSIGPENFIKMKTFMKNLVSKSQIGGDRVQIGVV QFSDINKEEFQLNRYMSQGEISDAIDRMAHIGETTLTGSALTFVSQYFSPAKGARPNVRK FLILITDGEAQDTVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENFDIL QHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDRDEYNIMKDFMIDLVKKADVGKN HVRFGALKYADDPEVLFYLDNLGTKREVISVLQNDQPMGGNTYTAEALGFSDHMFTEARG SRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAGSSD KYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKMKKFLA SVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGYTHIGSALR QVGHYFQPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEELRHRGINIYSVGIGDVDDQQ LVQITGTADKKLTVHNFDELKKVKKRIVRNICTSGGESNCFVDIVVGFDISTQQNGQNLL EGQSWMETYLQDILRAIRSLSGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSESILNS LKDVTVKRPSLLNENLLSSLWGAFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDELRKEG LNALITVALDGATNSNDLADLLYIEFGKGFEYRTQLTLGMRDLGSRLSKHLVSVAERTCC CLFCKCIGGDGTVGDPGPAGKKGPPGFKGSEGYLGEEGIAGERGATGPMGEQGTKGCYGA KGPKGNRGLNGQEGEVGESGIDGLSGEQGENGLPGAKGEKGDEGAQGIPGERGIPGDHGA KGLCGDPGVPGFDNSIEGPNGLKGEHGRQGRRGWPGPPGTPGSRRKTAVHGQRGHTGPQG KTGIPGPDGFAGSLGLKGPQGPRGEAGMKGEKGGLGSKGPQGLPGPAGEAGSQGRVGSQG NKGEPGDVGEKGAVGLWGPRGLPGDDGNPGYGSIGSKGAKGQEGFPGEIGPKGEVGDPGG PGETGPKGTGGKMVSAGLPGEPGSPGELGPPGRKGVKGAKGLPSFSTCELIQHVQDHSPG RHGAPQCPVHPTELVFALDQSRGVTEPEFTWMKEMMTSLLSGLRVRENHCPAGARVAVLT YDSHTRLLIRFSDAYRKDRLLREIKALPYEQSTSSRDIGKAMRFVSRNVFKRMLPGAHTR RIATFFSGGPSADAQTITTAGLEFSALDIIPVVIAFGQVPAIERSLVIDDTGRFQVIMVP HRIDSSPALEGLQRCTFCYDVCKPDASCDQARPPAVQSYMDAAFLLDGSRHMGSAEFEDI RGFLGALLDHFDITPEPETSVTGDRVALLSHAPPHFLPNTQRSPVRSEFNLTTYTSKRLM KRHVEESVQQLNGDAFIGHALQWTLNNVFLSTPNLRRNKVIFVISAGETSHLDRETLKKE SLRAKCQGYALFVFSLGPSWNDQELEDLASYPLDHHLVQLGRIHKPDHRYGVKFVKAFIS SVRRAINKYPPINIKAKCYKLSSADLRQPTRQLRSFLPGPQKATLKEDVLQKAKFFQHKK YLSRIARGSRDDTVQNFTRNTSHTFKSGKGVIKTAPKQHDKGARRV NT seq 6801 nt NT seq  +upstreamnt  +downstreamnt atgctgctcactttgctccttatgataatttgttcccatgtttctgtcaaccaacattct ggccctgagtatgccgatgtggtgtttctggtggacagctctgaccacatgggaattaaa tccttcccgtttgtaaagacattcatcaacaaaatgatcaccagcctccccatagaggcc cacaagtaccgtgtgggcctggcccagtacagcgatgggctccacagagaattccagctc agcaccttcaagagcagaggccccatgttgaaccacctcaagaagaacttcaggttcctg ggtggctccctgaggattggtaagactctccaggaggtacacacaacctacttctcaaac gggagggacaggagacagtttcctccgatcctggtggtcctggcttcagccgagtctgag gatgccgtggaagaggcctccaaggcgctgcgcaacgacggggtgaggatcatctccgtg ggtatgcagggggcgtccgaggagaccctgaaggccatggccacaggccagttccactac agcctccggacggtccgagacctcagcacgttctcccaaaacatgacgcagattctcaag gatgcggctcagtacaaggaaggagcagtcaatgacattcttgtggaagtttgccaaggc ccttctgtggcagatgttgtgttcctgttggatatgtccatcagcggcagctgggaggac tttgactatcttaaagaattcctggaagaaagtgtatctgctctggacatcaaggaaaac tgcatgagggttggccttgtggcctatagcaatgagacgaaggtgattaacccactgagc agtggcataaacaagtcggaggttctccaggatatacagagcctctctccccaggctggg aaggcctacactggagctgccttgagaaagatcaggaaggaggtcttcagcgtgcagcac ggcagccggaagaatcagggggtgccacagatagctgtgctggtgacccacagcccgtct gaggacaacgtgaccaaggctgctgtgaacctccggcgccagggcgtgaccatcttcacc atgggcatagacggggccagcgacgcccagctggagaagatcgcatctcaccctgccaag cagtacatctccaaactgaaaaccttctccgacctggctgcccacaaccagacgtttcta aagaaactgcggaaccagatcacacacacagtctctgtcatttccgaaaggactgaaacc ctcaaatctggttgtgtggacactgaggaagcagacatctatctgctcatcgatggctct gggagcacccaggccacggacttccaggaaatgaagaccttcctgtcggaggttgtaggg atgttcaacatcgctccccagaaggtgcgagttggggctgtccagtatgctgaccactgg gacttggaatttgagatcagtaaatacaccaacaagcatgatgtgggaaaggccatcgag aacatcaggcagctgggcgggaacacaaacacaggcgcagccttgaacttcaccctgggg ctgctgcagaaagcaaagaggcagcgggaaaacagagtgccaagccaccttgttgtcctg accaacggtgtgtcccaggacagcatcttggggcccgcaaacagactgagagaggagctc atccacgtctatgccattggggtcaaggaggccaacgagacacagctgcgagaaatcgca ggcgaggagaagcgggtgtactatgtgcgtgactttgatgccttgaaagacataagaaac caggttgttcaagaaatctgtgccgaagaagcctgcaaagagatgaaggccgacatcatg tttctggtggacagttctggcagtataggacctgaaaacttcatcaaaatgaaaacattt atgaaaaacctggtgagcaaatctcagattgggggagatagggtgcaaatcggtgtagtc cagttcagtgacatcaataaggaggagtttcagctcaacagatatatgtcccagggggaa atttcagatgcaatagaccgaatggctcacattggagaaactaccttgaccggtagcgcc ctgaccttcgtgtctcagtacttcagccctgccaagggggcccggcccaacgtcaggaag ttcctcattctcatcacggacggtgaggctcaggacacagtcaaggacccagcagtggca cttcggcaagaaggcataattatctactccgtgggggtgtttggctccaatgtcacccag cttgaggagatcagtgggaggccggagatggttttttatgttgagaattttgacattctg caacacattgaagatgaccttgtttttggaatatgcagcccccgtgaagaatgcaagcgc attgaagttttagatgtcgtgtttgtaattgacagctctggcagcattgaccgtgatgag tataatatcatgaaggacttcatgattgacttggtgaaaaaagctgatgtgggcaagaat cacgtccggtttggggctctgaagtatgcagatgacccagaggtgctgttttatctggat aaccttggcacaaaacgggaggtgatctcggtgcttcaaaatgaccagcccatggggggc aacacttacaccgccgaggccctgggcttctcagaccacatgttcactgaagcccggggc agccgcctgcacaagggggtcccccaggtcctcatcgtaatcaccgatggggaatcccat gatgccgataagctcaatgccacagccaaggccttacgggacaagggcatccttgtcctg gccgtggggatcgctggtgccaaccccgtggagctgctggccatggcaggatcaagtgac aagtacttctttgtggaaacttttggaggcctgaaggggatattttcagatgtgtccgcc agtgtgtgtaactcttcaaaagtagattgtgaaattgaaaaagtagacctcgtgttcctc atggatggttcgaatagcattcatccagatgacttcaagaagatgaagaaattcttggca tctgtcgttcaagacttcgatgtcagtgtcaacagagtgcgtataggagctgcccagttc agccacacctaccggccggagtttccactgggaactttcatcggcaaaaaggagatctcc tttcagattgaaaacatccagcagatctttggatacacgcacattggctctgctctccgg caggtagggcactacttccagccggacatgggcagccggatcaacacaggtaccccgcag gtgctgctggtcctcacagatggccagtcccaagacgaagtggctcaggccgctgaagag ctgagacacagagggatcaacatttactccgtgggcatcggggatgtggatgaccagcag ctcgttcagatcaccgggaccgccgataaaaaactgacagttcacaactttgacgaactg aaaaaggtcaagaagaggatcgttcgcaacatctgtacctcggggggtgagagcaattgc tttgtggacattgtggtgggatttgacatctcaactcagcagaatgggcagaatttgctt gaaggtcagtcttggatggaaacttaccttcaagacatcttacgtgccatcaggtccctc agtggggtaagctgtgaggtgggcacggagactcaggttagtgtggcttttcaagtgacc aatgccatggaaaaatattcccccaagtttgagatctacagtgaaagcatactgaacagc ttgaaggatgtaacagttaaaagaccatctcttctcaacgaaaacctcttgagttctctg tggggtgcatttcagaataaatcagctgctcggggaaaggtggttctcttattttcagat ggattggatgatgatgttgaaaaacttgaacaaaaatctgatgaacttagaaaagaaggc ctgaatgccctcatcacagttgctctggatggagccaccaattccaatgacctggctgac cttctctacattgaatttgggaaaggatttgaatacaggacacagctcactcttgggatg agggatcttgggagccgactgtcaaagcacctggtcagtgttgcagaaaggacatgctgc tgtttattctgcaagtgcattggaggagatggcacagtgggagaccctggaccagcaggg aaaaagggacccccaggttttaaaggcagtgaaggctacctgggagaggagggcattgct ggggaaagaggagccaccggaccaatgggagagcaaggtactaaaggatgctatggtgcc aaaggtcctaagggaaacaggggactaaatggacaggagggagaagttggggaaagtgga attgatgggttaagtggagaacagggtgaaaatggtcttccaggagcaaaaggagaaaaa ggagatgaaggagcccagggaatcccaggagagagagggattcctggtgaccatggagca aagggcctgtgcggagaccctggagttcctggatttgacaatagcatagaaggacccaat ggcttgaaaggggaacatggaagacagggaagaagaggctggccaggcccccctggaacc ccaggctccagaagaaaaacagcagttcatggccagaggggacatacaggcccacagggg aaaacaggcatcccaggcccagatggatttgcagggtcactgggacttaagggtcctcag ggcccaagaggagaggctggtatgaaaggagaaaaaggaggtctgggaagtaaaggtccc caggggcttccaggaccagcaggagaggcagggagtcaaggccgtgtgggaagccaagga aataaaggagaacctggcgatgtgggagaaaagggagccgttggcctttggggtcctcga ggcttgccgggtgatgatggtaacccaggttatggtagtattggaagtaaaggagcaaag gggcaagaaggattccctggagaaattggacctaagggtgaggttggggaccctggtggt ccaggagaaactggacccaagggcactggaggcaagatggtgtctgctgggcttccagga gagccgggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggggccaaa ggattgccttccttctccacatgtgagctcatccagcatgtgcaggaccacagtcctggc agacatggagccccgcagtgccctgtgcatcccacggagctggtgttcgcgctggaccag tcccggggcgtcacggagccagagttcacatggatgaaggagatgatgacctccctgttg agcggtctccgggtccgggagaaccactgccctgcgggcgcgcgtgtggccgtgctcacc tacgattcccacaccaggctcctcatccgcttctccgacgcctacaggaaggacagactc ctcagagagatcaaggcccttccttacgagcagtccacgtccagcagggacattggcaag gccatgaggtttgtctccaggaatgtcttcaagcggatgctcccaggggctcacaccaga agaatcgccacgttcttcagtggtggcccatctgcggatgcccagaccatcacgacggcc ggcctggagttcagcgccctggacatcatcccggtggtgatcgccttcggccaggtgccc gccatcgagcgctcgcttgtgattgacgacactggcagattccaagtcatcatggttcca cacaggattgactcttcaccagcactagagggactccagcggtgcactttctgctacgat gtctgcaagccagatgcttcttgcgaccaagccagaccaccagctgtgcaatcttacatg gacgctgctttccttctggatggctcccggcacatgggaagtgcagaatttgaagacata agaggcttcctgggagcactgttagatcactttgacatcaccccagagcctgagacctct gtcactggagaccgggtggccctattaagccatgctcccccccacttcctacccaacact cagaggagtcccgttagaagtgaattcaaccttaccacctacacgagtaaacgcctcatg aagaggcacgtggaagaatcagttcagcagctcaatggagatgcttttattggtcatgcc ttacagtggactctgaacaatgtcttcttgagtacacccaatctgagaagaaataaagtc atttttgtgatatctgctggggaaaccagtcacttggatagggaaaccttaaagaaagaa tccttgagagccaagtgccaaggttatgccttatttgtgttttcccttggcccttcttgg aacgaccaggaactggaagatctagccagctaccctttggatcaccacttggtccagctt ggccgcattcataagcctgaccacagatatggtgtgaagtttgtgaaggcctttataagc tcagtcaggcgtgcaatcaacaaatatccaccaataaacatcaaagcaaagtgctacaaa ctcagctctgcagatctgcggcagcccacgcgccagttgcgaagcttccttcctggacca cagaaagctaccctcaaagaagatgtattacagaaggcaaaattctttcaacataaaaaa tatctgtcaagaatagcaagaggcagcagagatgatactgttcaaaattttacgagaaac acatcccatacctttaaaagtgggaaaggagtgataaaaacggctcccaaacaacatgat aaaggtgctcgaagagtttag

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