Phocoena phocoena (harbor porpoise): 136122700
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Entry
136122700 CDS
T11058
Symbol
APH1A
Name
(RefSeq) gamma-secretase subunit APH-1A isoform X1
KO
K06172
gamma-secretase subunit APH-1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04330
Notch signaling pathway
pphc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136122700 (APH1A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
136122700 (APH1A)
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Gene cluster
GFIT
Motif
Pfam:
Aph-1
Peptidase_M3_N
Motif
Other DBs
NCBI-GeneID:
136122700
NCBI-ProteinID:
XP_065732845
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Position
1:complement(108669153..108672796)
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AA seq
340 aa
AA seq
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MGTRQGFVPSSASVEEVVPTCIWGFGVPAFPGVRGDIAPRPSRGRVATPRGLPGWRASSL
RLSWPGPHLAPSSPAMGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVS
LLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLS
EDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTA
AIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMG
LWAFITAGGSFRSIQRSLSCRRQEDSRVMVYSALRIPPED
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcggcaggggtttgtcccctcctcggcttccgtagaggaagtcgtgccgacc
tgtatctggggtttcggtgtccccgccttcccgggggtccggggtgacattgcaccgcgc
ccctcacggggtcgcgtcgccaccccacgcggactccctggctggcgtgcttcatccctt
cgcctctcttggccgggcccccacctcgcccccagcagcccagccatgggggccgcagtg
tttttcggatgcactttcgtcgctttcggcccggcctttgcgcttttcttgatcactgtg
gcaggagacccgcttcgcgtcatcatcttggtcgccggggcatttttctggctggtctcc
ctgctcttggcctctgtggtctggttcatcttggtccatgtgaccgaccggtcggatgcc
cgactccagtatggcctcctgatttttggtgctgcagtctctgtccttctacaggaggtg
ttccgctttgcctactacaagctgcttaagaaggcagatgaggggttagcatcgctgagt
gaggacggaagatcacccatctccatccgccagatggcctatgtttctggtctttccttc
ggtatcatcagtggtgtcttctctgttatcaatatcttggccgatgctcttgggccaggt
gtggttgggatccatggagattcaccctattacttcttgacttcagcctttctgacagca
gccattatcctgctccataccttttggggagttgtgttctttgatgcctgtgagaggaga
cggtactgggctttgggcctggtggttgggagtcacctactgacatcgggactgacattc
ctgaacccctggtacgaggccagcctgctgcccatctatgcagtcactgtttccatgggg
ctctgggccttcatcacagctggagggtccttccgaagtatccagcgcagtctctcgtgc
cgacggcaggaggacagtcgggtgatggtgtattctgccctgcgcatcccacccgaggac
tga
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