Phocoena phocoena (harbor porpoise): 136122767
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Entry
136122767 CDS
T11058
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136122767 (SMC4)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
136122767 (SMC4)
Condensin II
136122767 (SMC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
Mce4_CUP1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
136122767
NCBI-ProteinID:
XP_065732941
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All DBs
Position
4:41695338..41729696
Genome browser
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRRQEGPPQSPDGASSDAEPEPLPGRAGSLAPATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRFEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSNILSN
EMKAKNKDVKDIEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKARKLEKQLQK
DKEKVEEFKSIPAKSENIITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKES
REKELMDFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKTNEALMTASETLRERKAA
IGDIQGKLPQIEHELKEKEKQLQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVQVKDEEIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEQKVQLEEAVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLNVQVK
ELEANVLATAPDQKKQKLLEENVTAFKTEYNNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTA
ELKSLEDKAAEVVKNANAAEESLPEIQKEHRNLLKELKVIQENEHALQKDALSIKLKLEQ
VDGHIGEHNSKIKYWQKEISKISLHPIEDNPIEEIPLLSPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccaccgcccggcgcagacaggaagggccgccgcag
tccccggacggcgccagcagcgacgcggagcccgagccgcttcccggccgcgcggggagc
ctcgcgcctgccaccgcagagactccaagtgaggaaatagataatagaagtttagaagag
attttgaatagcatccctcctcccccacctccagcaatgaccaatgaagctggagctcct
cgtcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctgggacctttccataagcgcttttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactctcagttctaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaaggggatgattatgaagtagttcctaac
agtaacttttatgtatccagaacggcctacagagataatacttctgtttatcacataagt
gggaagaagaaaacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttacagggtgaagttgaacaaattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttgt
ggacggctaaatgaacctattaaagtcttgtgtcggagatttgaaatattaaatgaacac
agaggagagaagttaaacagagttaagatggtggaaaaggaaaaggacgccttagaagga
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcaatattacatttatgatctgcagaaacgaattgctgaaatggagactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgagaagagcaatatactgtcaaat
gaaatgaaagctaagaataaagatgtaaaagatatagagaagaagctgaacaaaattaca
aaatttattgaggagaacaaagaaaaatttacaaaactagatttagaagatgttcaagtt
agggaaaaattaaagcatgctacaagtaaagccagaaaactggaaaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagtatacctgccaagagtgagaatatcataact
gagacaacaactagaaataatgcccttgagaaagagaaagaaaaagaagaaaaaaaatta
aaggaagttatggatagccttaaacaggaaacacaagggcttcagaaagaaaaagaaagt
cgagagaaagaacttatggatttcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagcccaatcagaacttgatatctatctcagtcgtcataataccgcagtgtctcaatta
agtaagaccaatgaagctctaatgacagcttctgagactctcagagaaaggaaagctgca
attggagatatacagggaaaactccctcaaattgaacatgaactaaaggagaaagaaaaa
caacttcaaaaacttacacaagaagaaataaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagcgaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaatctggcagaattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaaatatgatattgctatttcatcctgttgtcatgcatta
gactacattgttgttgattctatcgatacggcccaagaatgtgtaaacttccttaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgaccaaaattcaaactcctgaaaatactcctcgattatttgatttagtacaagtaaaa
gatgaggaaattcgccaagctttttactttgccttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcagaaagatagaagatggagagtggtaacatta
caggggcaaatcatagaacagtcaggtacaatgactggtggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttgcagagagactctcaaaaagcagtgcaaattcaggaacagaaagtacaactg
gaagaagcagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagcccctgaccaaaaaaagcagaaattgctagaa
gaaaatgttactgctttcaagaccgagtataacaatgtggctgagagagctggtaaagtg
gaagctgaggttaaaaggttacacaatattatcgtagaaattaataaccataaactcaag
gcccaacaagataaacttgataaaataaacaaacaattagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacagca
gagctaaaaagtcttgaagacaaagcagcagaggtcgtaaagaatgcaaatgctgcagag
gagtccttaccagagatccagaaagaacatcgtaacctacttaaagaactaaaagtaatt
caggaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
gtagatggtcatattggtgaacataattctaaaataaaatactggcaaaaagagatttca
aaaatatcattgcatcccatagaagataatcctattgaagagattccacttctaagccca
gaagatcttgaagcaatcaagaacccagattccataacaaatcaaattgcactcttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggaa
gaattatatttacagcgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcatatgaagatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccaaatgcttactttgggaggtgatgctgag
ctggagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgtccgacca
cctaagaaaagttggaagaagatcttcaacctttcaggaggagagaaaacacttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtttccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgctaa
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