Phocoena phocoena (harbor porpoise): 136122789
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Entry
136122789 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04140
Autophagy - animal
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136122789
09160 Human Diseases
09164 Neurodegenerative disease
05022 Pathways of neurodegeneration - multiple diseases
136122789
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pphc01009
]
136122789
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136122789
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136122789
Protein phosphatases and associated proteins [BR:
pphc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136122789
Membrane trafficking [BR:
pphc04131
]
Autophagy
Other autophagy associated proteins
Others
136122789
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
136122789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
136122789
NCBI-ProteinID:
XP_065732961
LinkDB
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Position
4:12255306..12257636
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AA seq
762 aa
AA seq
DB search
MSAQTSPAEKGLKPGLLCQESYTCSGTDEGVSECDECCSLQCLRYEEKLQRQECLRNHER
IRLKAGHVPYCDPCKGPSGHPPGMKQTADVRCQTCKINLFLECQXRTHSEGNKRRHPVTV
YHVAKVQVLEEEGMDEDTKRKKMTEKVVSFLLVDENEKIQVTNEEDFIRKLDCKPYQHLK
VVSIFGNTGDEKSHTLNHTFFCGREVFKTSPAQESCTVGVWAAYDPVHKVAVIDTEGLLG
ATVNISQRTWVLLKVLAIXDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKQLKATTAR
CGLDVPLSTLGPAVIVFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEASSSIRYKG
TRTYNPPTDFSGLRRALEQQLENNTTRSLWHPGIIFKALKALSDHFSGEIPDDEMAHSSL
FPDEYFTCSVLCLSCGAGCKNSMNHGKEGVPHEAKSRCRYSHQYDNRVFTCKACYERGNE
VSVVPKTSASTDSPWMDLAKYAWSGRQYWFGNQYPVDTVVQTEIVHVWPGTNGFLKDNNN
AAQRLLDGMNFMAQSVSELSLGPTKVVTSWLTYQIASAYWRPNSQILSCNKCATSFKDND
IKHHCRAWGEGFCDSCSPMTRPVPEWGWGPAPVRVCDNCYEARNSQLDVTEAQGTSEGGM
LIAWKVGKSVQNTLGAVVTANDIPLGLVKDAARPVYWVPDHEILHYHNCQKEFSVKLSKY
HCWACRQGFCDECSHDHQAVPSRGWDHPVRVCFNGNKKPGDL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcagacgtccccagcagagaaaggtctgaagcctgggctgttgtgccaggag
agttacacctgcagcgggactgatgaaggcgtctccgagtgtgatgagtgctgcagcctg
cagtgtctccgctatgaggagaagctccagcggcaggagtgcctgagaaaccatgagcgg
atcagactcaaagctggccacgttccttactgtgacccctgcaagggccccagtgggcat
cctccaggtatgaagcagacggcagacgtgaggtgccagacctgtaaaatcaacttgttc
ctggagtgccagnagaggactcattctgagggtaacaaaaggaggcaccctgttactgtg
taccatgtggctaaggtccaggtgctggaggaagaagggatggatgaggacaccaagagg
aagaagatgactgagaaggttgtgagtttcctcctagtagatgagaatgaaaaaattcag
gtaacgaatgaagaggactttattaggaaattggactgcaaaccctatcagcatctgaaa
gtggtttccatttttggaaatactggggatgagaagtctcataccctcaaccacactttc
ttttgtggccgggaagtcttcaaaacctcccctgcccaggagtcctgcactgttggagtg
tgggcggcatatgacccagtccacaaagtagcagtgatagacacagaagggctcttgggg
gctacagtgaatataagccagagaacatgggtactgcttaaggttctggccattnnagac
ctcgtcatctatcgaactcatgcagaccgactgcacaatgacctcttcaagttccttggg
gacgcctcagaagcttatctgaagcacttcaccaagcagctcaaggctaccactgcccgc
tgtggcctggatgtccccctgtccaccctgggccctgctgttatcgttttccacgagact
gtgcacactcagctgctgggctctgatcacccctccgaggtgcccgagaagctcatccag
gaccggttccggaagctgggccgcttccctgaagcctccagttctattcgttacaaggga
acgaggacatacaatcctcccacagacttttctggtcttcggcgtgctttggagcaacaa
ctagagaataacaccacccgttctctctggcacccagggatcatcttcaaagctctgaag
gccctcagcgaccacttcagcggtgagatccccgatgatgagatggcacacagctccctt
tttccagatgagtacttcacctgctccgtcctgtgcctcagctgtggggctggatgtaag
aacagcatgaatcacgggaaagaaggagtacctcatgaagccaaaagccgctgcagatac
tctcaccagtatgacaaccgggtttttacctgcaaggcctgctacgagagaggcaatgaa
gtcagcgtggtgcccaagacgtctgcttcaaccgactccccctggatggatctcgcaaaa
tatgcctggtctggccggcagtactggtttgggaaccaatatcctgtggacacagtggtg
cagacagagattgtgcatgtgtggcctggaactaatggatttctgaaggacaacaacaat
gctgcccagcgcctcttggatgggatgaacttcatggctcagtcggtgtctgagcttagc
cttgggcccaccaaggttgtgacgtcctggctgacataccagatcgcctctgcctactgg
aggcccaactcccagatcctgagctgcaacaagtgtgctacatcctttaaagataatgac
atcaagcatcactgccgggcctggggggagggcttctgtgacagctgttcacccatgacc
cggccagtgccggagtggggctggggccctgcacccgtgagggtgtgtgacaactgctat
gaagccaggaattctcagttagatgtcaccgaggcacagggtaccagtgagggtgggatg
ctgattgcttggaaggtgggcaagtccgtgcagaacactttgggagccgtggtgacggcc
aatgacataccactaggtttggtgaaggatgcggccaggccggtgtactgggtaccagac
catgagatcctgcactaccacaactgccagaaggagttcagcgtcaagctttccaagtac
cactgctgggcctgcagacagggcttctgtgatgagtgttcccatgaccaccaggctgtc
ccctctcgaggctgggaccatcctgtccgagtctgctttaatggcaataaaaagcctggt
gacctttaa
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