Phocoena phocoena (harbor porpoise): 136122954
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Entry
136122954 CDS
T11058
Symbol
THRB
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04080
Neuroactive ligand-receptor interaction
pphc04081
Hormone signaling
pphc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136122954 (THRB)
04081 Hormone signaling
136122954 (THRB)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
136122954 (THRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136122954 (THRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pphc03310
]
136122954 (THRB)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136122954 (THRB)
Nuclear receptors [BR:
pphc03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
136122954 (THRB)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
136122954
NCBI-ProteinID:
XP_065733161
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Position
4:4157242..4512042
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AA seq
476 aa
AA seq
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MNFCVQELYELHPAAGSNCYMQATDYYAYFKDSPGYSGCNAQAVPGNNIYMEQAWAVNQP
YTCSYPGNVQKSKDSDLDMALNQYSQPEYFTEEKPTFSQLQSPSYSQKKGYIPSYLDKDE
LCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECR
FKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSIGHKPEPTDQEWELIKTV
TEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEH
YINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctgtgtgcaagaactctatgaattacacccagctgccggtagcaactgctac
atgcaggccactgattattacgcgtatttcaaagacagtccaggttacagtggttgcaac
gctcaggctgtgcccggtaacaacatatatatggaacaggcctgggcagtgaatcagcct
tatacctgtagttaccctggaaacgtgcagaaaagcaaggactctgacttggacatggcc
ctgaatcaatacagccaacctgaatatttcaccgaagaaaagcctactttttctcaactg
cagtcgccatcgtactctcagaaaaaaggctacatccccagttacttagacaaggacgag
ctatgtgtcgtgtgtggtgacaaagccaccggctaccactaccgctgcatcacgtgtgaa
ggctgcaagggtttctttagaagaaccattcagaaaaatctccatccatcctattcctgt
aaatatgaaggaaaatgtgtcatagacaaagttacaagaaatcagtgccaggaatgtcgc
tttaaaaaatgcatctacgttggcatggcaacagatttggtcctggacgacagcaagcgt
ctggccaagaggaagctgatcgaggagaaccgggagaaaaggcggcgggaggagctgcag
agatccatcggtcacaagcccgagcccaccgaccaggagtgggagctcatcaagaccgtc
accgaggcccacgtggccaccaacgcccaaggcagccactggaagcagaagcggaagttc
ctgccagaagacattggacaagcgccaatagtaaacgccccagaaggtggaaaggtcgac
ttggaagccttcagccattttacaaaaatcatcacaccagcaattaccagagtggtggat
tttgccaaaaagttgcctatgttttgtgagctgccatgcgaagaccagataatcctcctc
aaaggctgctgcatggagatcatgtcccttcgcgctgctgtgcgctacgacccagaaagt
gagactttaaccttgaacggggagatggcggtgactcggggccagctcaaaaacgggggt
ctcggggtggtgtccgacgccatcttcgacctgggcatgtcgctgtcttctttcaacctg
gatgacactgaagtcgcgctccttcaggccgtcctgctgatgtcttcagaccgcccaggg
cttgcctgtgttgagagaatagaaaaataccaagatagtttcctgctggcctttgaacac
tatatcaattaccggaaacaccatgtgactcacttttggccaaaactcctgatgaaggtg
acagatctgcggatgattggagcctgccatgccagccgcttcctgcacatgaaggtggaa
tgccccacagaactctttcccccattgttcttggaagtgtttgaggattag
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