Phocoena phocoena (harbor porpoise): 136123095
Help
Entry
136123095 CDS
T11058
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136123095 (WDR1)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
136123095 (WDR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EIPR1
Ge1_WD40
NBCH_WD40
WD_LRWD1
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
WDR54
WD40_RFWD3
RMC1_N
Beta-prop_NWD2_C
BBS2_Mid
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
PROPPIN
PQQ
Motif
Other DBs
NCBI-GeneID:
136123095
NCBI-ProteinID:
XP_065733239
LinkDB
All DBs
Position
5:101468593..101507960
Genome browser
AA seq
606 aa
AA seq
DB search
MPYEIKKVFASLPQVERGVSKIIGGDPRGNNFLYTNGKCVILRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRVWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVV
GEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFK
FKFTIGDHSRFVNCVRFSPDGNRFATAGADGQIYIYDGKTGEKLCALGGSKAHDGGIYAI
SWSPDSTHLLSASGDKTSKIWDINVNSVVNTFTMGSNVLDQQLGCLWQKDHLLSISLSGY
INYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGDKSYIYSGSHDGHINYWDSETGENDSFA
GKGHTNQVSRMTVDECGQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDIQPKCVAVGPGGY
TVVVCIGQIVLLKDQRKCFSIDSPGYEPEVVAVHPGGETVAVGGADGNVRLYSILGSTLK
EEGKLLEAKGPVTDLAYSHDGAFLAVCDASKVVTVFSTADGYSENNVFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWTIAY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgagatcaagaaggtgttcgccagcctcccccaggtggagaggggtgtctcc
aaaatcatcggcggcgaccccaggggcaacaattttctttacaccaatggaaagtgcgtc
atcctaaggaacatcgacaacccggccattgctgacatctacacggagcacgcccaccag
gtggtggtggccaagtacgcgcccagcggattctacatcgcctctggagatgtatctggg
aagctgagggtctgggataccacgcagaaggagcacctcttgaagtatgagtatcagcct
ttcgctgggaagatcaaggacattgcttggacggaagacagtaagaggatcgcagtggtc
ggggaaggaagggagaagttcggagccgtcttcctgtgggacagcggctcttctgtgggc
gagatcacgggacacaacaaagtcatcaacagcgtggacatcaagcagagccggccatac
cgcctggtgaccggcagcgacgacaactgcgctgcattctttgaggggccaccattcaag
ttcaagttcacaattggcgaccacagccgcttcgtcaactgtgtgcggttctctcctgat
gggaacagatttgccacagctggggccgatggtcagatctacatctatgacgggaagacg
ggagagaaattgtgtgccctgggaggaagcaaggctcacgacggtggcatttatgctatc
agctggagtcccgatagcacccacttgctttctgcttccggagacaaaacctctaaaatt
tgggacatcaatgtgaactctgttgtcaacacgtttaccatgggctccaacgttctggac
cagcagctgggctgcttgtggcagaaggaccacctcctcagcatctccctgtccggctac
atcaattacctggacaaaaacaaccccagcaaacctctgcgggtcatcaagggccacagc
aaatccatccagtgcctgacggtgcataaaaacggcgacaagtcttacatctactctggg
agccacgacgggcacattaattactgggattcagagacgggggagaacgactccttcgcc
gggaagggccacacgaaccaggtgtccaggatgaccgtggacgagtgcgggcagctggtg
agctgcagcatggacgacacggtgcggtacaccaacctcacgctgcgggactacagcgga
cagggagtcgtgaaactggacatccagccgaagtgcgtggctgtcggccccgggggctac
actgtggtcgtgtgcatcggtcagatcgtcctgctgaaggatcagaggaagtgcttcagc
atcgacagccctggctatgagcccgaggtggtggctgtgcacccgggtggcgagacggtg
gccgtcgggggtgcggatgggaacgtccgcctatactccatcctgggcagcacgctgaag
gaggagggcaagctcctggaggccaagggccctgtgacagacctggcgtattcccatgac
ggcgccttcctcgccgtgtgcgacgccagcaaagtggtcacggtcttcagcactgctgac
ggctactcggagaataacgttttctatggacaccatgcaaagatcgtctgcctggcctgg
tctccagacaacgagcacttcgcctcaggcggcatggacatgatggtgtacgtgtggacc
ctgagtgaccccgagaccagggtcaagatccaagatgcgcaccggctccaccacgtgagc
agcctggcctggctggacgagcacacgctggtcacgacctcccacgacgcctctgtcaaa
gagtggacaatcgcctactga
DBGET
integrated database retrieval system
