Phocoena phocoena (harbor porpoise): 136123167
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Entry
136123167 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136123167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136123167
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
136123167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
IPK
B12-binding
Motif
Other DBs
NCBI-GeneID:
136123167
NCBI-ProteinID:
XP_065733300
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Position
5:complement(52889484..52914011)
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AA seq
537 aa
AA seq
DB search
MTGFSSASPISESLSITIVPACLVHTNTSDALCFVEESYQPALENVDYLIQELXRPKYSI
YFIYFSNVISKSDVKSLAEPDEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPV
QLSRATQGLTALLLSLKKCPMIHYQLSSEAAKRLVECVKQVITKEYELFEFWRTEVPPLL
LILDRCDDAITPLLNQXTYQAMVHELLGINNNRIDLSRVPGISKDMREVVLSAENDEFYT
NNMYLNFSEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHMT
VVGELSLLVSEWNLLEVLEVEQELACQNDHSSVLQNIKSLLQNPKVTEFDACSLLMLYPL
HYEQHSSNSLPGXMMDLRNKGVSEKYRKLVSTVVEYGGKRVRGSDLFSPKDAVAITKHFL
KRLKGVENVYAQHQPFLHENLDHLIKGKLKENLYPYLGPSTLRDRHQDIIVFIIGGATYE
EALTVYNLNRTTPGVRIVLGGAAVHNTKSFLEEVLASGLHSQSKDSSQVTSRLASRR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtttctcatctgcctccccaatctctgaatcattgtccattacaattgtgcct
gcttgtcttgttcacacaaacacttcagatgctttgtgctttgtggaagaatcatatcag
ccagcattggagaatgtggattatctgattcaggagctctgaagacccaaatacagtata
tattttatttatttcagtaatgtgatcagcaagagtgatgtgaagtcattagctgaacct
gatgaacaggaagttgtggctgaggttcaggaattttatggtgattacattgctgtgaat
ccacatttgttttccctcaatattctgggttgctgccagggtcgaaattgggatccagtc
caactatccagagcaactcaaggactgacagctctccttttatctctgaagaaatgtccc
atgattcattaccagctttcatcagaggcagcaaagagacttgtagaatgtgttaagcaa
gtgataactaaagaatatgaactgtttgaattctggcggactgaggttcctcccttgcta
cttattttagatcgttgcgatgatgccatcaccccattgctaaaccagtgaacatatcag
gccatggtccatgaactactgggcataaacaacaatcggattgatctttccagagtgcca
gggatcagtaaagacatgagagaggtggtcctatctgctgaaaatgatgaattctacact
aacaatatgtacctgaacttttctgagattggtagcaacataaagaatctcatggaagac
tttcagaagaagaaaccaaaagaacagcaaaaactagaatcaatagcagacatgaaggcc
tttgttgagaattacccacaattcaagaagatgtctggaactgtatcaaagcacatgaca
gtggttggagagctgtctctgttggtcagtgagtggaatctgctggaggttttggaggtt
gagcaagaactggcctgtcaaaatgaccattctagtgttctccagaatataaagagtctc
ctgcagaaccccaaagtgacagagtttgatgcgtgcagcctgctgatgctttatcctcta
cattatgagcaacacagcagcaatagcctaccagganttatgatggaccttaggaataaa
ggtgtttctgagaagtatcgaaagcttgtgtctacagttgttgaatatggtggtaaacgg
gtcagaggaagtgatctcttcagccccaaagacgctgtggctattaccaaacatttcctc
aaaagattgaagggagtagaaaatgtatatgctcagcatcagcctttcttacatgagaac
ctggaccatctcatcaaaggaaagcttaaggaaaacctgtatccttatctaggccccagc
acactcagagacagacatcaggatatcattgtgtttataattggaggagccacctatgaa
gaggctctaacagtttataacctgaaccgtaccactcctggagtgaggattgtcctgggg
ggagccgctgtgcataacacgaaaagcttcctagaggaagttctggcttctggactgcac
agccaaagcaaggacagctctcaagttacatcaaggttagcaagcagaagatga
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