Phocoena phocoena (harbor porpoise): 136123169
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Entry
136123169 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136123169
03015 mRNA surveillance pathway
136123169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136123169
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136123169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
136123169
NCBI-ProteinID:
XP_065733303
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All DBs
Position
5:52951644..52952622
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AA seq
325 aa
AA seq
DB search
MHLSGVKKKSLLGVKEKNKKSSTRAPSPTKCKDRSDKQSKDRSKDKGATKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSCSSSSGSS
PGSPSPSRGRQDKRQRSCSKSKPPKRDEKERKRQSPLPKPTKVHIGRLTRNVTKDRIMEI
FSTYGKIKMIDMPVERMHPHLSKGYVYVXFENPDEAEKALKHMDMDGGHIDGQEITATAV
LAPGLGQPPPPAPRRFNPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPGRRSHRSRSSFN
SSRYAGPPKLCPATCIASNSLLSLF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaagaataaaaag
tccagcactagggctccttctcctaccaaatgcaaagaccgctctgataagcagtccaag
gatcgctctaaagataagggggccaccaaggagtcgagcgagaaggatcgtggcagggat
aaaactcgaaagaggcgcagcgcttccagtggtagcagcagcaccaggtctcggtccagc
tcgacttccagctcgggctccagcaccagcacaggctccagcagcggctccagctcatct
tcagcatcgagccgctcaggaagttccagcacatcctgcagctccagctccggcagctcc
cctggctctccgagtccttctcggggcaggcaggacaagaggcagcgctcctgctccaaa
tccaaaccacccaaaagagatgaaaaggaaaggaaaaggcagagccctttgcctaaacct
accaaagtgcacattggaaggctcaccaggaatgtgaccaaggatcgtatcatggagata
ttctccacctatgggaaaattaaaatgattgacatgcctgtagaaaggatgcacccacat
ctgtctaaaggctacgtatatgtgtagtttgagaatccagatgaggccgagaaggcactg
aagcacatggacatggacggaggacacatcgatggccaggagatcactgccacggctgtg
ctggcccctggcctcggccaaccccctcccccagccccccggcgattcaaccctcccagg
agaatgctgccaccgcctcccatgtggcgcaggtcacccccacggatgaggagaaggtcg
cgttcccctcggcgcaggtcccctggccgccgcagccacaggagccgctccagcttcaac
tcctcccgatacgcagggccaccgaagctctgtcctgcgacttgtatcgcatccaactca
cttctgtcacttttttag
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