Phocoena phocoena (harbor porpoise): 136123259
Help
Entry
136123259 CDS
T11058
Symbol
PABPC4L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03015
mRNA surveillance pathway
pphc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136123259 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
136123259 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136123259 (PABPC4L)
03041 Spliceosome [BR:
pphc03041
]
136123259 (PABPC4L)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136123259 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
136123259 (PABPC4L)
Spliceosome [BR:
pphc03041
]
Complex C
Other components
Complex C specific factors
136123259 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RRM_occluded
RRM_Nup35
RBD_DEAH11
RBD_RDR6
RRM_3
Motif
Other DBs
NCBI-GeneID:
136123259
NCBI-ProteinID:
XP_065733355
LinkDB
All DBs
Position
5:complement(130238115..130239296)
Genome browser
AA seq
364 aa
AA seq
DB search
MSLPELLRDRLAAVRSQEMHVAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRIC
RDLVTRRSLGYAYVNFLQLADAQKALDTMNFDPIKGKSIRLMWSQRDAYLRKSGIGNVMS
DDHGSRGYAFVHFQNQIAADRAIQEMNGALLKDCRLFVGRFKSRKDREAELQNKASEFTN
VYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHGAAKKAVEEMN
GKDINGQLLFVGRAQKKAERQAELKQMFEQLKQERFRRCRGAKLYIKNLDETIDDEKLRR
EFSSFGSISRVKVMQEEGRSKGFGLICFSSPEEATKAMTEMNGHILGSKPLNIALAQRPX
ERKT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcccggagctccttagggaccggcttgcggcggtgaggagccaggagatgcat
gtagcagccaagtaccgccaggcctccctgtacgtgggtgacctccacgcggacgtcacc
gaggacctgctgttcaagaagttcagcgctgtggggcccgtgctgtccatccgcatctgc
agggacctggtcacccgccgctctctgggctatgcctacgtgaactttctgcagctggcg
gatgcccagaaggccctggacactatgaactttgacccgataaagggcaaatccatccgt
ctcatgtggtctcagcgtgacgcctacttgaggaaatctggaattgggaacgtgatgagt
gatgatcacggctccaggggctatgcgttcgtgcactttcagaaccagattgccgccgac
agggccatccaggagatgaatggggcactgcttaaggactgcaggctgtttgttggcaga
ttcaagagccgcaaagatcgggaagccgagctccaaaacaaagccagtgagttcaccaat
gtttacattaaaaacttcggagatgacatggatgatgagagactgagggaagttttcagc
aaatatggaaaaaccctgagtgttaaggtgatgacagattccagtgggaaatccaaaggc
tttggctttgtgagttttgatagccacggggctgccaaaaaggctgttgaagaaatgaat
ggaaaggacataaatggacaactgctttttgtaggccgggcacaaaagaaagcagaacga
caggctgagttaaagcaaatgtttgagcagctgaaacaggaaagatttcggcggtgccgg
ggagcaaagctctatattaagaacctggatgagaccattgatgatgaaaagctacggagg
gaattttcttcatttggatcaattagcagagttaaggtaatgcaggaagaagggcgaagc
aaagggtttggcttgatctgcttctcctctcctgaggaggccactaaagcaatgactgag
atgaatggccacatcttgggctccaagccgctcaacatcgccctggcccagaggccctag
gagaggaaaacttaa
DBGET
integrated database retrieval system
