Phocoena phocoena (harbor porpoise): 136123272
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Entry
136123272 CDS
T11058
Symbol
POLN
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
136123272 (POLN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136123272 (POLN)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136123272 (POLN)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
136123272 (POLN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
GxDLY
Motif
Other DBs
NCBI-GeneID:
136123272
NCBI-ProteinID:
XP_065733365
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All DBs
Position
5:138191149..138350567
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AA seq
899 aa
AA seq
DB search
MEGYEAFLGFDLCKIPLSSVAQKIMSAMHSGDLVESKNWTESEKIAEVVDKSSVRYSVLP
EDGKNQSLEKKNLNSLTSQTSRVSIKFSSQSSSIRLTDQVSTDQNQKNISSLASSRCLIP
QCDQEASVLQKMEHKRKHVPKESINNENNEESMSLKRKRITRNNSSEKTSKLTALEEDAD
EVETHLNSRNSKAFTNNFCDIRYLDALEKSQLIEMLKQAVALVVTLIYKDGSTQLRADQA
LASSVEGIVMLPRSHAEKGSGPLAAPASDSVLEEGFMPSDQCIYIKTEPSSIWDQEQEAH
HQFARKVLLQTLECKCPVICFNAKDFLRTVMQFFGDDGSWKCVADFVGLDPRIAAWLIDP
TVAAPSFEDLVAKYFGNSITVKVNSTYGNSSRATVNQNVHANLRVLYGLTMGLCSQLKVY
GLWQLFCTLELPLIPILAVMESYSIQVNKEEMKRTSALLGSRLKELEQEAHFVAGEQFLI
TSSNQLREILFGKLQLHLLRPQETLPKTGLRRHPSTSEAVLNALQDLHPLPKIILEYRQV
HKIKSTFVDGLLACMKKGSVSSTWNQTGTVTGRLSAKHPNIQGISKHPIQITRPQNFQGK
DELLTISPRAVFVSSEGHTFLAADFSQIELRILAHLSGDPELLKLFQESERDDVFSTLTS
QWKDISPERVTHADREQTKKVVYSVVYGAGKERLAACLGVPVQEAAQFLESFLQKYKKIK
DFTQATIARCHQTGCVVSIMGRRRPLPRIRARDPQLRAQAERQAVNFVVQGSAADLCKMA
MIHLFTAVATSPILTARLVAQIHDELLFEVEDSQIPEFAALVRGTMEALQHVPAVELQLQ
VPLKVSLSVGRSWGHLAPLQEAPARDPTTVLPSLQATAQPPLVPERLPPCTHFSPSFGL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttacgaggcatttttaggctttgacctctgtaagataccactctccagtgtt
gctcagaagattatgtctgctatgcattcaggtgatttagtggagtctaagaattggaca
gagagtgaaaagattgcagaagtggtggacaaatccagtgttaggtattcagtactacct
gaagatgggaagaatcagtcactggagaaaaagaatcttaattctcttacgagccagacg
tcaagagtttccatcaagttctcttctcagtcctccagtatcagactcacagatcaagtg
tctactgaccaaaaccagaagaatatcagctcattggcttcttccaggtgtttaattcca
cagtgtgaccaagaggcttcagttctacagaaaatggaacataagagaaaacacgtacca
aaggaaagcataaataatgaaaacaatgaagaaagcatgagtctgaaaagaaaacgtatc
acacgtaataattcatcagagaaaacaagtaaacttacggcattggaagaagatgctgat
gaggttgaaacccacctaaattctaggaactcaaaagcattcacaaacaatttttgtgat
attaggtatttggatgctttggagaaaagccagctgattgaaatgctcaaacaggcagta
gctctggtggtaactctgatatataaggatggctcaactcagctgagagcagaccaggct
ctggcttcctctgttgaaggcattgtgatgttaccaaggagccatgcagagaaaggcagt
ggtcctctggctgccccagcctctgacagtgttctggaggaaggcttcatgcccagtgat
cagtgtatctacataaaaactgagccctcttccatttgggaccaagaacaagaggcacat
catcaatttgccaggaaggtgctgcttcaaacactggaatgtaaatgtcctgttatttgt
tttaacgccaaggatttcctgagaacagtgatgcagttttttggtgatgatggcagttgg
aagtgtgttgctgattttgtagggctggatcccagaattgctgcatggcttatagatcct
actgttgctgcaccctcttttgaagatttagtggcaaaatactttggaaactccatcaca
gttaaggtgaacagcacatacggaaattcctcaagagcgactgtgaatcagaatgtacat
gcgaacctgagggtgctctacggacttacgatgggcctttgttcccagctcaaggtttac
ggtttatggcaactgttttgtactttggagcttcctctgataccaattttggcagtgatg
gaaagctacagcattcaggtgaacaaggaagagatgaagaggacttcagcacttcttggg
tctcgtctcaaggaactggagcaagaagcccattttgttgcaggagaacagtttcttata
acaagcagtaatcagcttcgagagatcctgtttggcaagctgcagctgcacctgctgcgt
ccacaggagactctccccaaaacggggctccggagacacccgtccacatcagaagccgtg
ttaaatgctctacaagaccttcatccattacccaaaataattttggaatataggcaggtt
cacaagatcaagtcaacctttgtagatggattactagcttgcatgaaaaagggctctgtt
tcctccacgtggaaccagactggaaccgtgaccggaagactgtcagccaagcatcctaat
atccaaggcatctccaagcacccgattcaaataactagacctcaaaattttcaaggtaaa
gacgaactccttaccatctccccgagggccgtgtttgtttcatccgaaggccacaccttc
ctagcagcagacttttcacagattgaattacgcattcttgcacacttatctggggatcca
gaacttttgaagttattccaggaatctgaaagagatgatgtattttccaccctgacttca
cagtggaaggacatttccccagagcgcgtgacacacgcagacagagagcagaccaagaag
gtggtgtactcggtggtctatggagcagggaaggagcggcttgctgcttgccttggagtt
cccgttcaggaagctgcccagtttttggagagttttttgcagaagtacaagaaaatcaag
gacttcacccaagcaaccattgcccggtgtcaccagacaggctgtgtggtgtccatcatg
ggcaggaggaggccgctgccgaggatccgtgcacgtgacccgcagctccgggctcaagca
gagcggcaggcagtgaactttgtggtgcaaggctcggccgcagacctctgcaagatggcc
atgatccacctcttcacagcagtggccacatcccccatcctgacggccaggttggttgcc
cagattcacgatgagctgctgtttgaagtggaggattcacagattcctgagttcgcagcc
ctcgtcaggggaaccatggaggccctgcagcatgtgccggcggtggagctgcagctgcag
gtgcccctgaaggtgagcttgagtgttggccgctcgtggggacacctggcaccactgcag
gaggccccagcccgtgaccccaccaccgtcctgccgagtctccaagcaaccgctcagcca
ccgctggtccctgagcgcctacccccgtgcacgcatttttcgccttcatttggtctgtag
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