Phocoena phocoena (harbor porpoise): 136123315
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Entry
136123315 CDS
T11058
Symbol
SEC31A
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136123315 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136123315 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pphc02044
]
136123315 (SEC31A)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136123315 (SEC31A)
Secretion system [BR:
pphc02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
136123315 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
TPR_Sec16
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Prp18
SRA1
Motif
Other DBs
NCBI-GeneID:
136123315
NCBI-ProteinID:
XP_065733435
LinkDB
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Position
5:40480818..40545279
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AA seq
1253 aa
AA seq
DB search
MKLKEIDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTSASLEIFELDLSDPSLDMKSC
ATFSSSHRYHKLIWGPHKMDSKGDVSGVLIAGGENGNIILYDPSKIIAGDKEVVIAQNDK
HTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMTPGAKTQPPEDISCIAWNRQV
QHILASANPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPV
IQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSADGLRQKQVDKLSSSFGNLDPFG
TGQPLPPLQIPQQTAQHRIVLPLKKPPKWVRRPVGASFSFGGKLVTFASVRTQPQQGAEQ
QLQQHHVRISQVVTEEEFLSRSAQLQQVVQSQGFVSYCQKKIDASQTEFEKNVWSFLKVN
FEDDSRGKYLELLGYRKEDLGKKIASALNKVDGPDVALKDSDQVAQSDGEESPAAEEQLL
GERIKEEKQESEFLPSAGGTFNISISGDIDGLITQALLTGNFESAVDLCLHDNRMADAII
LAIAGGQELLAQTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYA
KPDEFSALCDLLGTRLESEGDSLLQTQACLCYICAGNVEKLVACWTKAQDGSNPLSLQDL
IEKVVILRKAVQLTQAMDTNTVGVLLAEKMSQYANLLAAQGSIAAALAFLPDNTNQPNIV
QLRDRLCRAQGNPAPGQQESPKIPYERQQLPKGRPGPVAGHTQMPRVPAQQYYPHVRIAP
TVTTWSNKTPTALPSHPPAASPSDTQGENPPPPGFIMHGNVNPNVATAQLPTSPGHMHTQ
VPPYPQPQPYQPAQQYSFGTGGSAVYRPQQPVAPSASNAYPNTPYISSASSYSGQSQLYT
AQHQASPPTSSSTASFPPPPSSGASFQHGGPGAPPSSSAYALAPGATGTLPAAGELPASQ
RTGSQNGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPLGDHQSQMLQQQPSAPVPLS
SQASFPQPHLPGGQPFHGIQQPLSQPGMPPSFSKPNIEGAPGAPIGNTMQHVQSLPTEKI
TKKPIPDEHLILKTTFEDLIQRCLSSATDPQTKRKLDDASKRLEFLYDKLREQTLSPTII
NGLHNIARSIETRNYSEGLTIHTHIVSTSNFSETSAFMPVLKVVLTQANKLGV
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaggaaatagatcgtacagccatgcaggcatggagccctgcccagaatcat
cccatttacctagctacaggaacatctgctcaacaattggatgcaacatttagtaccagt
gcttctcttgagatatttgaattagacctttctgatccgtccttggatatgaaatcttgt
gccactttctcttcttctcacaggtaccacaagttgatttgggggcctcataagatggat
tccaaaggagatgtctctggagttctgattgcaggtggtgaaaatggaaatattattctt
tatgatccttctaaaattatagctggtgataaggaagttgtgattgcccagaatgacaaa
catactggcccagtgagagccttggatgtgaacattttccagactaatttggtggcctct
ggtgctaatgaatctgaaatctacatttgggatttaaacaattttgcaactccaatgaca
ccaggagccaaaacgcagcccccagaagatatcagctgcattgcatggaacagacaagtt
cagcatattttggcatcagccaatcccagtggccgggccactgtgtgggatcttagaaaa
aatgaacctatcatcaaagtcagtgatcatagtaacaggatgcattgctctgggttggcg
tggcatcctgatgttgctactcagatggtccttgcctctgaggatgacaggttaccagtg
atccagatgtgggatcttcgctttgcctcctctccactccgtgtcctggaaaaccatgcc
agggggattttggcaattgcttggagcatggcggatcctgaattgttgctgagctgtgga
aaagatgctaagattctctgttccaacccaaacacaggagaggtgttatatgaacttccc
accaacacacagtggtgctttgatattcagtggtgtcccagaaatcctgctgtcttatca
gctgcttccttcgatgggcgtatcagtgtttattctatcatgggagggagtgcagatggt
ttaaggcagaaacaagttgacaagctttcatcgtcttttgggaatcttgatccatttggc
acaggacagccccttcccccgttacaaattcctcagcagactgctcagcatcgtatagtg
ttgcctctgaagaagccacccaagtgggtccgaagacctgttggggcttccttttcattt
ggaggcaaactggttacctttgcaagtgtcagaacacagcctcagcagggagctgagcag
cagctgcagcagcaccacgtgcgcatcagtcaggtcgtgacagaagaggaattccttagc
cggtcagcccaacttcagcaggtcgtgcagtcacaaggatttgtcagttattgtcagaag
aagattgatgcttctcagactgagtttgagaaaaatgtgtggtcctttttgaaggtaaac
tttgaggatgattctcgtggaaaataccttgaacttctaggatatagaaaagaagaccta
ggaaagaagattgcttcggctttgaacaaagtggatggacctgatgtggctcttaaagac
tctgaccaagtagcacagagtgatggggaggagagccctgctgctgaagagcagctcttg
ggagagcgcattaaagaggaaaaacaagaatctgaatttctaccatcagctggaggaaca
tttaacatctccatcagtggggatattgatggtttaattacgcaggctttgctgacgggt
aactttgagagtgctgttgacctttgtttacatgataaccgcatggctgatgccattata
ttggccatagcaggtggacaagaactcttggctcaaacccagaaaaagtactttgcaaaa
tcccaaagcaaaattaccaggctaattactgcagtagtgatgaagaactggaaagagatt
gttgagtcttgtgatcttaaaaattggagagaggctttagctgcagtattgacttatgct
aaaccagatgaattttctgccctttgtgatcttttgggaaccaggcttgaaagtgaaggt
gatagccttctgcagactcaggcatgtctctgctatatttgtgcagggaatgtagagaaa
ctagttgcatgttggactaaagctcaagatggaagcaatcctttatcccttcaggatctg
attgagaaagttgtcatcctgcgaaaagctgtacaactcacccaagccatggacactaat
actgtaggagttcttttggctgagaagatgagtcagtatgccaatttgttggcagcccag
ggcagtattgctgcagcccttgcttttcttcctgataacaccaaccagccaaatattgtg
cagcttcgtgacagactttgtagagcacaaggaaatccagcgccaggacaacaggagtca
cctaaaattccttatgagaggcagcagctgcccaagggcaggcctggaccagttgctggc
cacacacagatgccaagagttccagctcaacaatattatccccatgttagaattgccccc
actgtcactacctggagtaacaaaactcctaccgcccttcccagccatccacctgcagcc
tctccctctgatacacagggagaaaatcctccacctccaggcttcataatgcatgggaat
gttaatccaaatgttgccacagctcagcttcccacatctcccggtcatatgcacacccag
gtaccaccttatccacagccacagccttatcaaccagcccagcagtattccttcggaaca
ggggggtcagcagtgtatcgacctcagcaacctgttgctccttctgcttcaaacgcttac
cctaacaccccgtacatatcttctgcttcttcctattctgggcagtctcaactatacaca
gcacagcaccaggcctctccacctacctccagctccactgcctctttccctcctcctcct
tcctctggagcatccttccagcatggcggaccaggagctccaccgtcatcttcagcttat
gcgctggctcctggagcaacaggtacactgcctgctgccggcgagctgcctgcatcccag
agaacaggttcccagaatggttggaatgatcctccagctttgaacagagtacccaagaag
aagaagatgcctgagaactttatgcctcctgttcccatcacatcaccaatcatgaacccc
ttgggtgaccaccagtcacagatgctgcagcaacaaccttcagctccagtaccactatca
agccaagcttcattcccacagccacaccttccaggtggccagcccttccatggcatacag
caacccctcagtcaaccaggcatgcctccgtctttttcaaagcccaatattgaaggtgcc
cctggagctcctattggaaataccatgcagcatgtgcagtctttgccaacagaaaaaatt
accaagaaacctattccagatgaacacctcattctaaagaccacatttgaggatcttatt
cagcgctgcctctcttcagccacagatcctcaaaccaagaggaagctagatgatgccagc
aaacgtttggagtttctatatgataaacttagggaacagacactttcaccaacaatcatc
aatggtttacacaacatcgcaaggagcattgagactcgaaactactcagaaggattgacc
atccatacccacatagttagcaccagcaacttcagtgagacctctgcttttatgccagtt
ctcaaagttgttctcacccaggccaataagctgggtgtctaa
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