Phocoena phocoena (harbor porpoise): 136123390
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Entry
136123390 CDS
T11058
Symbol
ABCE1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136123390 (ABCE1)
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
136123390 (ABCE1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
AAA
Fer4_6
AAA_15
RsgA_GTPase
AAA_29
NACHT
AAA_16
nSTAND3
AAA_30
Fer4_10
SRP54
LdpA_Fe-S-bd
Fer4_2
TsaE
ORC-CDC6-like
Fer4_21
Fer4_7
Fer4_16
Fer4_4
AAA_19
AAA_5
Fer4_3
AAA_23
UDG-inhib_P56
Fer4_9
Motif
Other DBs
NCBI-GeneID:
136123390
NCBI-ProteinID:
XP_065733642
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All DBs
Position
5:24568714..24609860
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AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVVPQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGCILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaattaacaagaattgctattgtcaatcatgacaaatgtaaacctaagaag
tgtcggcaggagtgcaaaaagagttgccctgtggttcgaatgggaaaattatgcatagag
gttgtcccccagagcaaaatagcatggatttctgaaactctttgtattggttgtggtatt
tgtattaaaaagtgcccctttggtgccttatcaattgtcaatttaccaagcaacttggaa
aaagaaacaacacatcgatactgtgccaacgccttcaagcttcacaggttgcccattcct
cgtccaggtgaagttttgggattagttggaactaatggtattggaaagtcaactgcttta
aaaattttagcaggaaagcaaaagccaaaccttggaaaatatgatgacccacctgattgg
caagaaattttgacttacttccgtggatctgaattgcagaattactttaccaagattctt
gaagatgacctaaaagccattatcaaacctcagtatgtagaccagattcccaaggctgca
aaggggacagtggggtgtattttggaccgaaaagatgaaacaaagacgcaagcgattgta
tgtcagcagctcgatttaacccatctaaaagagcgcaatgttgaagatctttcaggagga
gagttgcagagatttgcctgtgctgtcgtttgtatacagaaagctgatattttcatgttt
gatgaaccttctagttacctagatgtcaagcagcgtttaaaggctgctattactatacga
tctctaataaatccagatagatatatcattgtggtggagcatgatctaagtgtattagac
tatctctctgacttcatctgctgtttatatggcgtaccaagtgcttatggtgttgtcact
atgccttttagtgtaagagaaggcataaacatttttttggatggctacgttccaacagaa
aacttgagattcagagatgcatcacttgtttttaaagtagctgagacagcaaatgaagaa
gaagttaaaaagatgtgtatgtataaatatcctggaatgaagaaaaagatgggagagttt
gagctagcaattgtagctggagagtttacagattctgaaatcatggtgatgttgggtgaa
aatggtactggtaaaacgacgtttatcagaatgcttgctgggagacttaaacctgatgaa
ggaggggaagtaccagttttaaatgtcagttataagccacagaaaatcagtcccaaatca
accggaagtgttcgccagctactacatgaaaagatcagagatgcttacactcatccacaa
tttgtaactgatgtaatgaagcctctgcaaattgaaaacatcatcgatcaagaggtgcaa
acattatctggtggtgaactgcagcgagtagctttagctctttgtttgggcaaacctgct
gatgtctatttaattgatgaaccatctgcatatttggattctgagcaaagattgatggct
gctcgagttgtcaaacgtttcatactccatgctaagaagacagcctttgttgtggaacat
gacttcatcatggccacctatctagcagatcgagtcattgtttttgatggtgttccatct
aagaacacacttgcaaacagtcctcaaacacttctggctggcatgaataaatttttgtct
cagcttgaaattacattcagaagagatccaaacaactataggccaagaataaacaagctc
aattcaattaaggatgtagaacaaaagaagagtggaaactactttttcttggatgattag
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