Phocoena phocoena (harbor porpoise): 136123431
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Entry
136123431 CDS
T11058
Symbol
NKX1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136123431 (NKX1-1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
136123431 (NKX1-1)
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Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
136123431
NCBI-ProteinID:
XP_065733724
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Position
5:138840235..138843895
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AA seq
433 aa
AA seq
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MSASGPAATGDGPALPPPPPGPGPGPAPPAPAAAAARDAMDGRAELPAFPRAGAPPLAAS
DTVPAAPEGAGAARPGPPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPAPAAP
GRPPRSEELERRALAAAGEAGAGTAAEPPHAGDPCKADEAEANGYSSGGGRSPSADSGDE
APDDEDEDEAPEAGAARGAEARGGGSGLGARGSGCQGEAEAPPGAVDEAAVPGPRGNSPG
APGPPGASAAPGDAGTTPQGAATATKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF
KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGSG
PGAGLPGGLSPLSPSPPMGAPIAMHGPAGYPAHGPGGLVCAAQLPFLSSPAVLSPFVLGS
QTYGAPAFYAPHL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagcggcccggcggctaccggggacggccccgcgctgccgccgccgccgccc
gggcccggtccggggcccgcaccgcccgcgcccgccgccgccgccgcccgggacgccatg
gacgggcgcgctgagctgcccgccttcccgcgggccggagccccgccgctcgccgccagc
gacacggtgcccgcggcgcccgagggggctggggcggcccggcccggcccgccgccgcgc
cccacctccttctcggtgctggacatcctggaccccaacaagttcaacagcagaagacgc
cgctgtgtgctgctgggccccgtggcgcccgcggcgtgcgccccggcccccgccgccccg
ggacgcccgccgcgctcagaggagctggagcgccgtgccctcgccgccgccggagaagct
ggagccggtaccgcagctgagccgccgcacgccggcgacccctgcaaggcggacgaggcc
gaggccaacggctacagcagcggcggtggccgcagcccgagcgcggacagcggggatgag
gcgcccgacgacgaggacgaggacgaggcgcccgaggcgggggcggcgcgcggcgctgag
gcgcggggaggcggcagcggcctcggggcccgcgggtcgggctgccagggcgaggccgag
gcgcccccaggcgctgtcgatgaggccgctgtccccggcccccgtgggaactcgcccgga
gccccgggcccgccgggagcctcggcggcgcccggggacgcggggacgaccccgcagggc
gcggcgacggcgacgaagcccaagcggaagcgcacgggctccgactccaagtccgggaag
ccgcggcgcgcgcgcaccgccttcacctacgagcagctcgtggcgctggagaacaagttc
aaggcgacgcgctacctgtcggtgtgcgagcgcctcaacctggcgctgtcgctgagcctc
accgagacgcaggtgaagatctggttccagaaccgccgcaccaagtggaagaagcagaac
ccgggcgccgataccagcgcgccgaccggcggcggagggggaccggggccgggttccggg
ccgggtgcggggctgcccggtggcctcagcccgctcagcccgtcgccgcccatgggcgcg
ccgatcgccatgcacggcccggccgggtacccggcgcacggccccggcggcctggtgtgc
gccgcacagctgccctttctgtcgagcccggcggtgctgtcgcccttcgtgctgggctcg
cagacctacggcgcgcccgccttctacgcgccgcacctctga
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