Phocoena phocoena (harbor porpoise): 136123539
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Entry
136123539 CDS
T11058
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136123539 (SH3TC1)
Membrane trafficking [BR:
pphc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
136123539 (SH3TC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_NPHP3
TPR_7
SH3_1
CFAP70_mid_TPR
Motif
Other DBs
NCBI-GeneID:
136123539
NCBI-ProteinID:
XP_065733898
LinkDB
All DBs
Position
5:136293234..136320987
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AA seq
1250 aa
AA seq
DB search
MGSYPTDLTLQLLAVQRQSGLPDPSLQQVLRGRLRLLENDSWEVARALGELSARLLSIHS
DQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQTFWLLEPDEDQETAIQVHVDEE
ALKLTHESLLFQEGPFFVLCPDHHVKVMNGLQPLRQASGFPRAEAALAVDSLAPSHNTSS
EERTAVEPLIPFHQWALRVPWDPINDSMGGPVTPDIQPMAVGLASAVADCQGSGPEEMTF
RSGDHIEILGAQVPGLPWCLGRHVASGQVAFVQTSLISAQGQVSDLENVIFLNEEERSFF
SSEGRFSEEDARQLLRRTSSTDVCTVYSLDTEEAEMQQQEEHEMPPPCLHPEPRETLQKV
KNVLERCKSCRGCPKEPGSPGVHRASGDASSPDTKEPSFRLDAGDARADPEALGSLLQFL
DKPGFEAGFQGLYGLSPPGLHGVFGGFTDDEELARLLAEARGVAKKAGLPMALARLCFLL
GQLCVRRLKLSQARVYFEEALGALGGRFGDLVLVAAVYTSLAAVHLRQKNREKCAQVVPK
ALALLLGTPGHVGGSEAESGLLKLGLRRAIGARSPQAEARACFLLAKHHARDKRPEEALP
YLERLLQLHGASGAPGASWPVDCYLLLADVYSRKCLPHLALSCVKVASRRARGSLDSALR
SAALVLRDSPQLPRLPAQLAPYLLQALASPASGAGRALRGPIYASLARLHSQHGRQGRAI
AFMTRAAETDAQIGGRTVVDRLVALAWLHVLHRQIPAALDILESVLEAAVAALDQEGVIA
NMAAIGLKRMRRTQQAAEGYHRALRVARRLGRQRNKAVVLANFGTLCLQTGAGRLAQHYF
LEAVKLFSRLPSGECGPDFTQVLLRLGHLCTRRALTRQGKCYYEWAFLVAVETDHLESQL
HAVQRLCHFYSTVMPSEAQCVVYHEFQLSLARRVADKVLEGQLLEAISQLYLSLGTERAY
KSALDYTKRSLGIFIDLQKKDKEAHAWLRAGKIYYILQQNELVDLYIQVAQNAALYTGDP
KLGLQLFEAAGDIFFNGTWEREKAVSFYRDRALPLAVNTGSQEAELRLCNKLAALLAETE
APQEGLEFAHTALALSITLGDRLNERVAYHRLAALHQQLGHGELAEHFYLKALSLCTSPL
EFDEETLYYVKVYLVLGDIIFYDLKDPLDAAGYYQLALAAAVDLGNKKAQMKIYTRLAAI
YHNFLLDREKSLFFYQKARTFATELNIRRGHLAPGRCCGRAAWLVPGPPS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctaccccacagacctgactttgcagctgctggctgtgcagaggcaaagcgga
ttgcccgaccccagcctgcagcaggtcctgcggggccggctccgtcttctggagaatgac
agctgggaggtggcccgtgctctcggggagctatcggccaggctgctgtccatccacagt
gaccaggatcggattgtggtgacgtttaagacttttgaagaaatctggaagttttccacc
taccacgctctcggcttcactcatcactgcctggaaaacctgcttgtggaccagaccttc
tggctgctcgagcctgatgaagaccaggagacggccatccaagtccacgtggatgaggag
gccttgaagctgacgcacgagagcctccttttccaggaagggcctttctttgtgctgtgt
cctgaccaccatgtgaaagtgatgaatggcctccagcccctcaggcaggcttcggggttt
ccccgggcagaggcggccctggcagtggactctttggcccccagccacaacacatcctca
gaggagcggacagccgtggagcctttgattccgttccatcagtgggctcttagggtcccc
tgggaccccatcaacgactccatgggtggacctgtgacaccggacatccagccgatggct
gtgggcctggcctcggccgtggcggactgccagggctcagggcccgaagagatgaccttc
cgaagcggggaccatatcgagatcctgggcgcccaggtgcctggcctgccctggtgcctg
ggccggcacgtggcctccggccaggtcgcctttgtgcagacaagcctcattagtgcgcag
ggccaagtgtctgacttggaaaatgtgatttttctcaatgaagaggaaaggtctttcttc
agcagcgaaggacgcttttctgaggaggatgccaggcagctactcaggaggacgtccagc
acggacgtctgcactgtgtacagcttggacacagaagaagctgagatgcagcaacaggaa
gaacatgagatgcccccgccttgcctgcacccagagccacgtgagaccctgcagaaggtg
aagaatgtcctagaacgatgcaagtcctgccgcggctgccccaaggagccagggtccccg
ggcgtccacagggcatccggtgacgcgagctcgccggacaccaaggagccctccttccgc
ctggacgctggggatgcccgggccgacccggaggccctgggctccctgctgcagttcctg
gacaagcccggcttcgaggccggcttccagggcctgtacggcctctccccgcccgggctg
catggcgtgtttggaggcttcaccgacgacgaggagctggcccggcttctggctgaggcc
cggggggtggccaagaaggccgggctgcccatggccctggccaggctctgcttcctgctg
gggcagctgtgcgtccggcggctgaagctgtcccaggcccgcgtgtacttcgaggaagcc
ctgggggcgctggggggccgcttcggggacctcgtcctggtggcggccgtgtacaccagc
ctggccgccgtccacctgcggcagaagaacagggagaagtgcgcgcaggtggtgcccaag
gccttggccctgctcctggggacgcccggccacgtcggcggctccgaggccgagtcgggg
ctcctgaagctgggcctgcggagggctatcggcgcccgcagcccacaggccgaggcccgg
gcctgtttcctgctggccaaacaccacgcccgcgacaagcggcccgaggaggccctgccc
tacctggagaggctgctgcagctgcacggggcctcgggggctccgggcgcctcgtggccc
gtagactgctacctgctgctggcggacgtctacagccgcaagtgcctcccgcacctggcg
ctgagctgcgtcaaggtggcctcgcggcgggcgcggggctcgctagacagcgcgctccgg
agcgcggccctggtcctgcgggacagcccccagctcccccgcctccccgcccagctcgcc
ccctacctcctgcaggccctggcctccccggcctcgggcgcggggcgggcgctgcgcggc
cccatctacgccagcctggcccggctgcacagccagcacgggcgacagggcagggccatc
gccttcatgacgcgggccgcggagacggacgcccagatcggcggccgcacggtcgtggac
cgcctggtggccctcgcctggttgcacgtgcttcacaggcagatcccggcagcgctggac
atcttggagtccgtcctggaggcggcggtggccgccctggaccaggaaggcgtgatcgcc
aacatggcagctattggcctgaagaggatgcgcaggacccagcaggcggccgagggctac
caccgcgccctgcgggtcgccaggcgcctgggtcgccagcggaacaaggcggtggtcctg
gccaacttcgggaccctgtgcctgcagaccggcgccggcaggctggcccagcactacttc
ctggaggccgtgaagctcttctcgcggctgcccagtggagagtgcggcccagacttcacc
caggtgctcctgcggctgggtcacctgtgcacccgcagggccctcacccggcagggcaag
tgctactacgagtgggcctttctggtcgccgtggagacggaccatttggagagccagctg
cacgccgtccagcggctgtgtcacttctacagcacagtcatgcccagtgaggcccagtgc
gtcgtctaccacgagttccagctttcgctggcccgcagggtggccgacaaggtgctggag
gggcagctcctggaggccatcagccagctctacctgtccctgggcaccgagagggcctac
aaatccgcgctggactacaccaagcgcagtctggggatattcatcgacctgcagaagaag
gataaggaggcacacgcctggctgcgggcggggaagatctactatatcctccagcagaac
gagctggtggatctctacatccaggtggcacagaacgcggccctgtacacaggggacccc
aagctggggctgcagctctttgaggcagctggagacatcttcttcaacgggacctgggag
cgggagaaagctgtgtccttctaccgggacagggcgctgcccctggccgtgaacacgggg
agccaagaggccgagctgcggctctgcaacaagctggcagcgctgctggccgagacggag
gcgccgcaggagggcctggagttcgcccacacggccctggcactcagcatcaccctcggg
gaccggctgaacgagcgggtggcctaccatcggctggccgccctgcatcagcagctgggc
cacggggagctggccgagcacttctacctcaaggcactctcgctctgcacctcgccactg
gaatttgacgaggagaccttgtactacgtgaaggtgtatctggtgctcggcgacatcatc
ttctacgacctcaaggacccgctcgacgcggccgggtactaccagctggcactggcagcg
gccgtggacctgggcaacaagaaggcgcagatgaagatctacacgcgcctggctgccatc
taccacaacttcctcctggaccgggagaagtccctgttcttctaccagaaggctcggacc
ttcgccaccgagcttaacatccgccggggacacctggcccctgggcggtgttgcgggcgg
gcggcctggctggtccccgggcccccgtcctga
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