Phocoena phocoena (harbor porpoise): 136123696
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Entry
136123696 CDS
T11058
Symbol
PCDH10
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136123696 (PCDH10)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136123696 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
CDC13_N
Motif
Other DBs
NCBI-GeneID:
136123696
NCBI-ProteinID:
XP_065734129
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All DBs
Position
5:129428825..129447661
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AA seq
1042 aa
AA seq
DB search
MIVLLFFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTAPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGAGGGGAGGGLLPQQQRTGTALLTIRVLDSND
NVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFGLSP
RTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVIVRVLDANDNAPEISFSTVKE
AVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAPLDREA
GDSYTLTVVARDQGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIYAV
SATDRDEGANAQLAYSILECQIQGMSVFTYVSINSENGYLYALRSFDHEQLKDFSFQVEA
RDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLTRVAA
VDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQ
PPLSSTATLVVQLVDGSVEPQGGGGGGGGGSGEHQRPSRSGGGETSLDLTLILIIALGSV
SFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCSGGGSTCCGRQARARKKKLSKS
DIMLVQSSNVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRS
TDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADI
VSSKDSGHGDSEQGDSDHDATNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQ
AADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLERKELDGLLSNT
RAPYKPPYLNHFHSLSYFVHWK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattattcttcgccttgctctggatggtggaaggagtcttttcccagctt
cactacacggtccaggaggagcaggaacatggcactttcgtggggaatatcgctgaagat
ctgggcttggacattacaaaactttcggctcgcgggtttcaaacggcgcccaactctcgg
accccttacttggacctcaacctggagaccggggtgctgtacgtgaacgagaagattgac
cgcgagcaaatctgcaagcagagcccctcctgcgtcctgcacctggaggtcttcctggaa
aaccccctggagctgttccgggtggagatcgaggtgttggacatcaatgacaaccccccc
tccttcccggagccggacctgaccgtggagatctctgagagcgccacgccgggcacccgc
ttccccttggagagcgcattcgacccagacgtgggcaccaattccttacgcgactacgag
atcacccccaacagctacttctccctggacgtgcagacccagggggatggcaaccgattc
gccgagctggtgctggagaagccgctggaccgagagcagcaagcggtgcaccgctacgtg
ctgaccgcggtggacgggggaggaggggccggaggaggcggagcgggagggggcctgctc
ccccaacagcagcgcaccggcacggccctactcaccatccgagtgctggactccaacgac
aatgtgcccgccttcgaccaacccgtctacactgtgtccctcccagagaactcgccgccg
ggcacgctcgtgatccagcttaacgccacggacccagatgagggccagaatggcgaggtc
gtgtattccttcagcagccacatttcgccccgggcgcgggagctcttcggactctctcct
cgcactggccgactggaggtgagcggcgagctggactacgaagagagcccggtgtaccaa
gtgtacgtacaagccaaggacctgggccccaacgccgtgcccgcgcactgcaaggtgatc
gtgagagtgctggatgctaacgacaacgcgccagagatcagcttcagcaccgtgaaggag
gcggtgagcgagggcgcggcgcccggcacggtggtggccttgttcagcgtgaccgaccgc
gactcagaggagaatgggcaggtgcagtgcgagctgctgggggatgtgccgttccgcctc
aagtcttccttcaaaaactactataccatcgtgaccgaggcccctctggaccgagaggcg
ggggactcctacaccctgaccgtggtggctcgggaccagggcgagcctgcgctctccacc
agcaagtcgatccaggtgcaggtgtccgatgtgaacgacaacgcaccgcgattcagccag
ccggtctacgacgtgtatgtgaccgaaaacaatgtgccgggcgcctacatctacgcggtg
agcgccacagaccgtgacgagggcgccaacgcccagctagcatactctatcctcgagtgc
cagatacagggcatgagcgtcttcacttacgtatccatcaactccgagaacggctacttg
tacgccctgcgctccttcgaccacgagcagctcaaggacttcagcttccaggtggaagcc
cgggacgccggcagcccccaggcgctggctggcaacgccactgtcaacatcctcatcgtg
gatcagaacgacaacgcccctgccatagtggcgccccttccggggcgcaacgggactccg
gcgcgcgaggtgctgccccgctcggcggagcccggttacctgctgacccgcgtggccgcg
gtggacgcggacgacggcgagaacgcccggctcacctacagcattgtgcggggtaacgaa
atgaacctcttccgcatggattggcgcaccggggagctccgcacggcgcgccgggtgccg
gccaagcgcgacccccagcggccttacgagctggtgatcgaggtgcgcgaccacgggcaa
cctcccctgtcctccaccgccaccctggtggtgcagctggtggatggctctgtcgagccc
cagggcgggggcgggggcgggggcggggggtcaggggagcaccagcgccccagccgctcc
ggcggcggggagacctcgctggacctcaccctcatcctcatcatcgcgctgggctcggta
tccttcatcttcctgctggccatgatcgtgcttgccgtgcgttgccaaaaagagaagaag
ctcaacatctacacgtgtctggccagcgactgctgcctctgctgctgctgctgcagcggt
ggcggctcgacctgctgcggccgccaagcccgggcgcgcaagaagaaactcagcaagtcg
gacatcatgctggtgcaaagctccaacgtacccagtaacccggcccaagtgccggtggag
gagtccgggggcttcggctcccatcaccacaaccagaattactgctaccaggtctgcctg
acccccgagtccgccaagaccgacctgatgttccttaaaccctgcagcccttcgcggagt
acggacactgagcacaacccttgcggggccatcgtcaccggctacacagaccagcagccc
gacatcatctccaacggaagcattttgtccaacgagactaaacaccagcgagcagagctc
agctatctagttgacagacctcgccgagttaacagttctgcattccaggaagccgacata
gtaagctctaaggacagtggccatggagacagtgaacagggagatagtgatcacgatgcc
accaaccgcggccagtcagctggtatggatctcttctccaactgcactgaggaatgtaaa
gccctgggccactcagatcggtgctggatgccttcgtttgtcccttctgatggacgccag
gctgctgattatcgtagcaatctgcatgttcctggcatggactctgttccagacactgag
gtgtttgaaactccagaagcccagcctggggcggagaggtccttctccaccttcggcaaa
gagaaggcccttcacagcaccctggagaggaaagagctggatggactgctgtctaataca
cgagcgccttacaaaccaccatatttaaaccattttcattctctttcttattttgtacat
tggaagtaa
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