Phocoena phocoena (harbor porpoise): 136123752
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Entry
136123752 CDS
T11058
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136123752 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136123752 (HERC3)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136123752 (HERC3)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
HECT type E3
136123752 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
136123752
NCBI-ProteinID:
XP_065734174
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All DBs
Position
5:7875696..7999126
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AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGMSANLQGIVAEPQVCGFVSDRSVKEVACGGSHSVFLLEDGEVYTCGL
NTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGERGQLGTGHTCNVKCPSPVKGCWAAHSGQLSARADRFK
YRIVKQIFSGGDQTFVLCSKYENSSPAVDFRMMNQAHYTSLINDETIAVWRQKLSEHNNA
NTINGVIQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMSSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEVSSLVDIQEDYLMWFLHQAGMKARPSIMQDAITLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRSSLVGDALRELS
IHSDIDLKKPLRVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDVEETFCLNFTICRESYGVIEQKQLIPGGDRVAVCKENRQEFVDAYVNYVFQI
SVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEALEETAIYKGDYSATHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYN
LLDLPQYSSKEVLCARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctctgggccaacctgggatgagcgctaacctgcaaggg
attgtggccgagccacaggtgtgtggatttgtatccgacagaagcgtcaaggaagtggcc
tgcggaggaagccactccgtgttcctgctggaggatggggaagtttacacgtgcggtttg
aacaccaaggggcagctgggccacgagagggaaggaaacaagccagagcaaattggagct
ttggcagatcagcatattgtccacgtggcgtgtggcgagtcccacagtctggccctcagt
gaccggggccagctgttttcttggggtgcagggagcgatggtcaactaggactcatgact
accgaggactctgtggcagtacccaggttaatacagaagctgaaccagcagacaatattg
caagtttcctgtggcaactggcactgcttggctcttgcagctgatggccagttcttcacg
tgggggaagaacagccatgggcagctgggtctggggaaggagttcccctcccaagccagc
ccgcagagggtgaggtccctggaggggatcccgctggcgcaggtgactgcaggaggcgcc
cacagctttgccctgtctctctcgggagccgtatttggctgggggatgaataacgcgggg
cagctcgggctcagtgacgagaaagatcgagagtctccttgccacgtgaagctcctgcga
acacaaaaagtcgtctatatcagttgcggagaagagcatacagcagttctcactaaaagc
ggaggtgtgtttacctttggtgctggttcctgtgggcaacttggacatgattccatgaat
gacgaggttaatccaagaagagttctggagctgatgggcagtgaagtcactcagattgcc
tgtggcagacaacacaccctagcctttgtgccttcttctggactcatctatgcatttggt
tgtggagaaagaggtcagttaggaactggacacacttgtaatgtcaagtgcccgtctcct
gtgaaaggttgctgggccgcccatagcggccagctttcagccagagctgatcgctttaaa
taccgtattgtcaagcagatcttctctggaggagaccagacttttgtactttgctccaaa
tatgagaattcttctcctgccgtcgacttcaggatgatgaaccaagcacattacaccagt
ttaatcaatgatgaaaccatagcagtctggagacaaaaactctcagaacacaacaatgca
aatacaatcaacggggtcattcagatactatcttcggcagcctgttggaatggaagcttc
cttgagaaaaaaattgatgagcattttaaaacaagtcccaaaatccctgggattgacctg
aactcaactagagtgttatttgagaagttaatgagctctcagcactccatgattctagaa
cagatcttaaacagctttgaaagttgcctgattcctcagttgtcaagttcaccaccagat
gttgaagcaatgagaatctacttaatactaccggagtttcccctgctccaggattctaag
tattacataacgttgactattcccctggctatggccattctgcggctggatacaaacccc
agcaaagtcttagataactggtggtctcaggtatgcccgaaatatttcacgaagctggta
aacctctataaaggtgcagtcgtttatctactgagaggaagaaagacattcttaattcct
gtactgtttaacaattatattacagcagcgctcaagctcttggagaagttatacaaggta
aatcttaaagtgaagcatgtggaatatgataccttttatattcctgaggtttccagtctt
gtggacatccaggaagactacctcatgtggttcttacatcaagcaggcatgaaggctaga
ccatctataatgcaggatgctataacactttgttcctaccctttcatcttcgatgcccaa
gccaagaccaagatgttacagaccgatgctgaactacagatgcaggtggcggtcaacggg
gccaacctgcagaatgtcttcatgcttctcaccttggagcctctgctggccagaagcccc
ttcctggtccttcatgttcgcaggagcagccttgttggagatgccctgagagagctgagc
attcattctgatattgatttaaaaaagcctctcagagtcatttttgatggtgaagaagca
gtggatgctggtggtgtcacaaaggagttctttcttttactattaaaagaattgttgaat
cccatctatggaatgtttacctactatcaggattcaaatctcttgtggttttcagatacg
tgttttgtagagcacaactggtttcacttgattggcataacctgtggactcgccatctac
aactccaccgtggtggacctgcacttcccgttggctctctataagaagctactgaacgtg
aagcctggcctggaagacttgaaggagctgtcacccacggaaggaaggagtcttcaagaa
cttctagattaccctggggaagatgttgaggagactttctgcctcaacttcacgatttgt
cgagaaagctatggcgtgattgaacagaagcagctgatacctgggggagacagagtggct
gtgtgcaaggagaacaggcaggaatttgtggatgcttatgtgaattatgtcttccaaatc
tcagttcatgaatggtacacagctttctccagcggcttcctaaaggtgtgtggcggcaaa
gtgcttgagctcttccagccttcggaactgagggccatgatggtggggaacagcaactac
aactgggaggcactggaggagactgccatctacaagggagattactcagccacacatccc
actgtgaaactattttgggaaacatttcatgagttcccattggaaaagaagaagaagttt
ctcttgttcctgacaggcagcgatcgcatccccatctacggcatggccagcctgcagatt
gtcatccagtccacagccagcggggaggagtacttgcccgtggcccacacttgctacaac
cttcttgacctcccccagtacagcagcaaagaggtcctgtgtgcacggctgacccaggcc
cttgacaactacgaggggttcagcttggcctga
DBGET
integrated database retrieval system
