Phocoena phocoena (harbor porpoise): 136123881
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Entry
136123881 CDS
T11058
Symbol
HMX1
Name
(RefSeq) homeobox protein HMX1
KO
K09349
homeobox protein Nkx-5
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136123881 (HMX1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
136123881 (HMX1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
136123881
NCBI-ProteinID:
XP_065734309
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Position
5:complement(136785152..136789058)
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AA seq
356 aa
AA seq
DB search
MPDELTEPGRATPARASSFLIENLLAAEAKGAGRAAQGGGGREDEEEDDDDPEDEDAEQA
RRRRRLQRRRQLRAGSGPSGDARARALLGPGALGLGPRPPPGPGPPYALGCGGATRWYSR
SHGGYGGGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGAEEA
ADLAEARAAAAAAAAAGEARGGGGGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERA
GLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLVRVPVLYHESPPAAA
AAAAGAPAALPFPLAPAAPAPPPPLLGFSGALAYPLAAFPAAASVPFLRAQMPGLV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgagctgacggagcccgggcgcgccacgccggcccgcgcctcctccttcctc
atagagaacctgctggcagccgaggccaagggcgctgggcgcgcggcccagggcggcggc
ggccgcgaggacgaggaggaggacgacgacgaccctgaggacgaggacgcggagcaggcg
cggcggcggcggcggctgcagcggcggagacagctgcgcgcgggctccgggccgagcggg
gacgcgcgggcccgggcgctgcttgggccgggcgcgctgggcctcggtccccggccgccc
ccgggtcccgggccgccctacgctctgggctgcggaggcgccacgcgctggtactcgcgg
tcgcacggaggctacggaggcggcctcagccctgacaccagcgaccgggactcaccggag
acgggcgaggagatgggccgcgcagagggcgcctggccgcggggccccgggccgggagcg
gtgcagcgggaggcggcggagctggcggcgaggggcccggcagccggcgcggaggaggcg
gcggatctggccgaggcccgggcggcggcggcggcggcggcggcggcgggggaggcgcgc
ggcggcggtgggggcggtggccgcaagaagaagacgcgcacggtcttctcgcgcagccag
gtcttccagctcgagtccaccttcgacctgaagcgctacctgagcagcgccgagcgcgcc
ggcctggccgcctccctgcagctcaccgagacgcaggtcaagatctggttccagaaccgc
cgcaacaagtggaagcggcagctggcggccgagctggaggcggccagcctgtctccgccg
ggcgcgcagcgcctggtccgcgtgccggtgctctaccacgaaagccccccggccgccgcc
gccgccgccgccggagctcccgccgcgctgcccttcccgctggcgcccgccgcgcccgcc
ccgcccccgccgctgctgggcttctccggggccctcgcctacccgctggccgccttccca
gccgccgcctccgtgcccttcctgcgggcgcagatgcccggcctggtgtga
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