Phocoena phocoena (harbor porpoise): 136123932
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Entry
136123932 CDS
T11058
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136123932 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136123932 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
136123932 (PDLIM5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
136123932
NCBI-ProteinID:
XP_065734367
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Position
5:13152665..13367022
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AA seq
625 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATPKPEPVPVQKPTVTSVCAETAQELAEGQRRGSQ
GDSKQQNGKILPKRPPRKHIMDRYTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSF
RILAQITGTERMKESETDNTKKAKFDSSLEDLPESGPHPPATPQVLHIGSQVATLSKVTT
YPSLSSSTRNVATSSLEGSRNLSTLSSPARYSAAVLSSAAATVSAVLAAKTRLSSPEKYH
SLLDALCISPVPKPLAFSYLQPSRKSTGSVHVKKTSSAQEPSQPLAAAAAAAGSTPEGPG
IPGSARPGVAGLTTAAAFKPLGSTGGIKSPSWQRPNQAAPSTGRVASSGTSTGAVASANS
AERQPQPSDEDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKN
TMAYIGFVEEQGALYCELCYERFFAPVCGRCQRKILGEVINALKQTWHVSCFVCVACGKP
IRNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALAYTWHDTCFVCSVCCE
SLEGQTFFSKKDKPLCKKHAHSVNI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggttggcccagctccttggggtttccggctacaaggt
ggcaaggatttcaacatgcctctgacaatctctagcctaaaagatggcggcaaagcatcc
caggcaaacgtaagaataggtgatgtggttctcagcattgatggaataagtgcacatggc
atgactcatcttgaagcccagaacaagattaagggttgtacaggctctttgaatatgact
ctgcaaagagcatctgctacacccaagcctgagccggttcctgttcaaaagcccacagtc
accagcgtgtgtgccgagactgcccaggagctagcggagggacagagaagaggatcccag
ggtgacagtaaacagcaaaatgggaaaatcctacccaaacgcccaccaagaaaacacatt
atggatcgttatacagagttttatcacatacctactcacagtgatgccagtaagaagaga
ctgattgaagatactgaagactggcgtccaaggactggaacgactcagtctcgctctttc
cgaatcctagcccagatcactgggactgaacgtatgaaagaatctgaaactgataataca
aagaaggcaaagtttgacagttctctggaagatctacctgagagtggacctcacccacct
gcaactcctcaggttttacatattggtagccaagtagccacactttctaaagtaactacg
tatcctagtttaagcagctccacaagaaatgtggcgacaagttctttggaagggtctcga
aacttgtctaccttgtcttctcctgctagatatagtgctgccgttctgagcagtgcggcc
gctactgtgtctgctgttcttgctgcaaaaaccaggctctccagtcctgaaaaatatcac
tcactcctggatgcactttgcatcagccctgttcccaagcctttagctttttcgtatctc
cagccctcgagaaaatcaactggctctgtccatgttaagaaaaccagcagcgcccaggag
ccctctcagccgctggccgccgcagcagctgcagctgggagcacgcctgaggggccggga
atcccaggctcggccagaccaggggtggccgggctcaccactgctgccgccttcaagcct
ctaggttccaccggcggcatcaagtcaccaagctggcaacggcccaaccaagcagcacct
tctaccggaagagtcgcaagcagtgggacatccacaggagcagtggcatcagccaactca
gccgaaaggcagccccagcccagtgatgaggacactttggtgcaaagggccgagcacatt
cccgcagggaaacgaactccgatgtgtgcccactgcaaccaggtcatcaggggaccattc
ctagtggcactggggaaatcttggcacccagaagaatttaactgtgctcactgcaaaaat
acgatggcctacattggattcgtagaggagcagggagccctgtattgtgagctctgctat
gagagattctttgcacctgtatgtggtcgatgccagaggaagatccttggagaagtcatc
aatgctttgaaacaaacttggcatgtttcctgttttgtgtgtgtggcctgtgggaaaccc
attcgtaataatgtctttcacttggaggacggcgagccctactgtgagaccgattattat
gccctctttggcactatatgccatggatgtgagtttcccatagaagctggtgacatgttc
ctggaagctctggcctacacctggcacgacacttgctttgtatgctcagtatgttgtgaa
agtttggaaggtcagacctttttctccaagaaggacaagccactttgcaagaaacatgct
cactccgtgaatatttga
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