KEGG   Phocoena phocoena (harbor porpoise): 136124076
Entry
136124076         CDS       T11058                                 
Symbol
UBAP2
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pphc04121]
    136124076 (UBAP2)
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136124076 (UBAP2)
Ubiquitin system [BR:pphc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    136124076 (UBAP2)
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     136124076 (UBAP2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N UBA_8 UBA DUF1510 Methyltransf_32 CUE
Other DBs
NCBI-GeneID: 136124076
NCBI-ProteinID: XP_065734480
LinkDB
Position
6:34899301..34988437
AA seq 1132 aa
MMTSVSSDRSKGAREKPQISATQATQLQKQVVQATAEQMRLAQVIFDKNDSEFEAKVKQL
MEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGGKKKNFGKESSENKENR
EKRSEREVSRGRGSNNRKVRGGNRGREFRGEENGIDCNQGDKPSDRGKRARGRAFGRGRG
RGAGRFSTQGMGTFNPADYSDSPSIDGCGTKPVGWEAAQNGADEGTELASNAQNVAQNLP
NKNSLGLKGAWKNSVDEWTTEDWTEDLSETKVFTSSSAAAEHLVTPGQSVDLVALLQKPV
PHSQASEVNSFETSQQQGFGQALVFTNSQHNSQMAQGTGSSTAVNPYPPQSLSSVLGSGF
GELAPSKMANITSSQIMDQLEAPSLGQFTTTPSSQQNNTGPPTTASSWDLKPSASQSSVL
SHFDFKSQPEPSPVLSQLSQRQQQQTQAVTVPPPGLESFPSQVKLRESAPRDSSTSTVNK
LLQLPSMTVENIAVSAHQPQPKHIKLPKRRIPPASKIPASAVEMPGSADVTGLNVQFGAL
EFGSEPSLSEFGSAASSENSSQIPISLYSKSLSDSLNTSLAVTSAVQNSTHTTSVITSSS
LTSSSLSSTSPVTTSSSYDQSSVHERSAYQSSVSPSESAPGTIMNGHGGSRSQQTVDTPS
SVPAPKTTDPPSALPSVGSLPSTTSCTQLLPSVPQHTAALPSLSQPGDLSSSPLSQLSSS
LSGHQSSLSSAHTVLSTSTSHTHAGVESAPSLQSSATFSTAATCASSAASSGLSLPSSVN
AVSSLCLGGAAVSAPGSSARATPLASSGKEPPSLPQGAPPLLHSQYLVGPGGLLPAYPVY
GYDELQMLQSRLPMDYYGIPFATPAALTSRDGSLANNPYSGDVTKFGRGDSASPAPATTL
AQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYTGVPSAFQYGPTVFVPPASAKQHGV
SLSSPTTPFQQASGYGQHSYSAGYDDVSQGAAAGDYTKGGYGGSSQAQSKSAGSGPGKGV
SASSSGPGLPDVTGSVYSKTQTFDRQGFHAGTPPPFSLPSALGSPGPLGPGYAPSPLVHV
LPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGNSPYWTN
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgatgacttcggtgagcagtgaccggtccaaaggtgctcgggaaaagccacagatttca
gcgacacaggcaacacaactacagaaacaagtggtacaggcaacagctgaacagatgcgt
cttgctcaagtgatctttgataaaaatgattcagagtttgaagctaaagttaaacagctt
atggaagtgacaggaaaaaatcaggatgaatgcatagtggctctgcatgactgtaatgga
gatgtcaacaaagctatcaatatattgctggaagggaattcagacacgacttcatgggag
actgtaggagggaagaagaagaattttggaaaagaaagttcagaaaacaaagagaataga
gagaagagaagtgagagagaagtgagccgtgggcgcggaagcaacaaccggaaagtaaga
ggtggcaatcgtgggagagagtttagaggtgaagagaatggaattgattgcaatcaaggg
gacaagccttcagaccgtggcaagagagctcgtggtagagcgtttggacgtggcagaggg
agaggggcaggaagattctcaacacaaggcatggggacatttaaccctgcggactattca
gattctccatctatagatgggtgtgggacaaaaccagtaggttgggaagctgctcagaat
ggtgcagatgagggaactgaactggcatcaaatgctcaaaatgtagctcagaatctgcca
aacaaaaattctttgggactcaaaggggcctggaagaattctgtggatgagtggacaacg
gaagactggactgaagatctttctgaaacaaaggtcttcacttcctcatctgctgcagca
gagcaccttgtcacacctgggcaaagtgttgatctggtagccttgctccagaagcctgtt
cctcacagtcaagcctcagaagtcaactcctttgaaacttcccaacagcagggctttggc
caagcccttgtcttcacaaattctcagcacaacagtcagatggcacaagggactggcagc
tccactgctgtcaatccctatccacctcagagtctgtcatccgtccttggttcaggattt
ggagagctcgcaccttccaaaatggcaaacatcaccagctcccagattatggaccagttg
gaagctccaagtttgggccagtttaccaccaccccaagttcacagcagaataatacaggt
cctcccacaaccgcttcttcttgggacctcaagccctcagcatcccagtcctcagtcctt
agtcattttgacttcaaatctcagcctgagccatcccctgttcttagccaactgagccaa
cgacagcagcagcagactcaggcagtcactgttcctcctcctgggttggagtcctttcct
tcccaggtgaaactccgagagtcagcacccagagacagcagtacctccactgtgaacaaa
cttctgcagcttcccagcatgactgtcgaaaacatcgccgtgtctgctcaccagccacag
cctaaacacatcaaactccctaagcggcgaatacctccagcttctaagatcccagcttct
gcagtggaaatgcctggttcagcagatgtcacaggattaaatgtccagtttggcgccttg
gaatttggatcagaaccttctctctctgaatttggatcagctgcaagcagtgaaaatagt
agccagattcccattagcttgtattcgaaatctttaagtgactctttgaatacctcccta
gcagtgaccagtgcagtgcagaactccacccacacaacttcagtcattacctcctccagt
ctgaccagctcatcgctgagctccactagtcccgtaacaacatcttcctcctacgaccag
agttctgtgcatgaaaggagcgcataccaaagctctgtgagtccatcggagtcagctcca
ggaaccatcatgaatggacatggtggtagtcgaagtcagcagacagtagacactccttca
tctgttccagctccaaagacaacagaccctccctccgccctcccatccgtgggctccctg
cccagcaccacctcctgcactcagcttctgccctctgtaccccagcacactgccgctctg
ccctccttgtcccagcctggtgacctgtccagcagccccctctctcagcttagcagctct
ctctccggccaccagagcagcctctcctctgcgcacacggtgctctccaccagcacgtca
cacacgcatgccggcgtggagagcgccccttccctccagtcctcagccaccttctcaacg
gcagcaacctgtgcctcgagtgccgcgtcctcagggctcagcctgccaagcagcgtgaac
gcggtcagcagcctctgcctgggcggtgccgccgtgagtgcccccggcagcagtgccagg
gccacgcccttggcgagctcaggcaaagagccccccagcctgccccagggggcgcctccc
ctgctgcacagccagtacctcgtgggccccggaggactgcttcctgcctacccggtttat
ggctatgacgagctccagatgctgcagtcgcggctgccgatggattactatgggattcct
ttcgctacacccgcagccctcaccagtcgagatgggagccttgctaataatccctattca
ggtgatgtcacaaagtttggccgaggagactctgcgtcccctgcacctgccaccaccctg
gctcagccccagcagagccagtcccaggcccaccacacagcccagcagccctttctgaac
cctgccctgccacctggctacagctacactggcctcccctactatacaggcgtacccagt
gccttccagtatgggcccaccgtgtttgtccccccggcctcagccaagcagcacggtgtg
agcctcagcagccccaccacccctttccagcaggccagtggctatggccagcacagctac
agtgcaggttacgatgacgtgagccagggggcagcagcaggagactacaccaagggtggc
tatggtggatcatcgcaggcacagagcaagtctgcaggttctgggcctggcaaaggagtg
tcggcgtcttcgagcggccccggcctccctgacgtgactgggtccgtctacagcaagact
cagactttcgacaggcagggatttcacgcagggaccccaccaccgttcagcctgccctcg
gccttgggctcccctgggcccctgggccccggttacgcgccctcaccgctcgtgcacgtc
ctgcccgcccaccagcagcctcactcacagctgctgcaccaccacctcccgcaggacgct
cagagcggctccggtcagcgcagccagcccagctccctgcagcccaagtcgcaagcctcc
aaacctgcctacggcaactctccatactggacaaactga

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