Phocoena phocoena (harbor porpoise): 136124082
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Entry
136124082 CDS
T11058
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04015
Rap1 signaling pathway
pphc04510
Focal adhesion
pphc04722
Neurotrophin signaling pathway
pphc04910
Insulin signaling pathway
pphc05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
136124082 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136124082 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
136124082 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
136124082 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
136124082 (RAPGEF1)
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Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
136124082
NCBI-ProteinID:
XP_065734493
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Position
6:complement(110675357..110814776)
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AA seq
1263 aa
AA seq
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MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
PEKPVNKEATDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPVKPSS
PACKPDGQSELPLTDREMEILNKTTGLSQSAEGLPDSTDEEVAPPKPPLPGIRVVDNSPP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
ESPRLSPCSSIGKLSKSDEQLSSLDRDSGRCSRNTSCETLDHYDPDYEFLQQDLSNADQI
PQQVACNLSPLPESLGESGSPFLGHPFQLPLGSCPQPEGPSAPGQQVDVPPALPEKKRRS
AASQTADSSGCRASYERHPSQYDNISEEDLQNPASVQSVPFTPFAAVLPFQQGGSSASVE
FVGDFTVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYRTPQKEHIYQQKN
KLLMEVYGFSDSFSAGDAPQELAPPPALPPKQRQLASYAASSFSSVSYCVQQTKVAFTPE
DGSATQGISVSVSNSFLSRHGNLPVPSYKSVFRSYSQDFVPHSQASIQPFLPSTSSSSPH
FPPVHQSQSSDLAVPTVASPPPSTLDGPLSSSQESSFHGNTVCLPSETSFTDSPQTPSSE
RASEGESVSVYASGQSSEDTAFSFQESPTSKDGHPRDASSAGSAPGKESRDGGDRAPKSP
DAPEAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVEL
TEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCANSDQPLAARGVAARPG
TLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
AEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQ
QFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDRE
EKT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcctcggcctccggcgcagcccggaaatgtccggcaagatcgagaaagca
gactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccactca
cccaaaatcaagagaacgccatcaaagaagggaaaaccagctgaggtgtctgtgaagatt
ccagagaagcctgtgaacaaagaggcaacagacagatttctaccagagggctaccctatc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcaaaggcagaagaacctgagctggctggaagagaaagagaaggaggttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactggagatg
cttccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagcgaccct
cgaattcagcacagctcagccctctcctcctgctatagccgagtgtaccaaagtctcgcc
aacctcattcgttggtctgaccaagtgatgctagaaggtgtgaactcagaagataaagag
atggtgacaactgtgaagggggtcatcaaagccgtgctggacggagtgaaggagcttgtc
agacttaccatcgagaagcaggggcatccgtctccaacaagcccagtgaaacccagttcc
ccagcctgcaaacccgacggccagtctgagctccccttgacagatcgagagatggagatt
ctaaacaagacgaccggcctgtcgcagtcggccgaggggctcccagattccacggatgaa
gaggtcgcgccccccaaaccccccttacctggcattcgtgtggttgataatagtcctcca
ccagcattgccaccgaagaagagacagtcggctccatcccctacccgagtggccgtcgtg
gcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaataggcaggat
tttgacgtggactgttacgcacagagacgactgtcgggcggcagccactcttatggcggc
gagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcggacgagcag
ctgtcgtctctggacagggacagcgggcggtgctcccggaacacaagctgtgagactcta
gatcattacgaccctgactacgaattcctccagcaagacctctctaacgcagaccagata
cctcagcaagtggcctgtaacctcagcccgttgccagagtccttgggggagtctgggtct
ccgtttctcggccatcctttccagttgcctctgggcagctgtccccagccagaggggccc
tcggccccagggcagcaggtggacgtgccgcccgctcttcccgagaagaagcgcaggagc
gcggcctcccagacggcggacagctctggctgcagggcatcctacgagcggcacccctcg
cagtacgacaacatctccgaggaggacctgcagaacccggcctcggtccagtccgtcccc
ttcacgccctttgctgctgttcttccctttcagcaaggaggttcctcagcctctgttgaa
tttgtgggtgatttcactgttcctgaatcaacaggtgacccagaaaaacctcctcctcta
ccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggactactcggag
ccgcagccctccatgttctaccggacgccgcagaaggagcacatctaccagcagaagaac
aagctcctcatggaggtgtatggcttcagcgactctttcagcgccggggatgccccgcag
gagctcgccccgccccccgccctgccccccaagcagcggcagctggcctcctatgctgct
tcttccttctcctctgtctcctactgtgtccagcaaactaaagtggccttcactcccgag
gacggcagtgccactcagggcatcagtgtgtccgtctctaactcctttctcagccggcac
ggcaacttacctgtgccctcgtataaatctgtgtttaggtcctactcccaggatttcgtg
cctcacagccaagcttccatccagcctttcctcccgtctacctcctcttcctctccacat
ttcccacctgtccaccagtctcagagctctgacttagcggtgccaaccgtagccagtccg
cctcccagcaccttggacgggcctctttcatcttctcaggagagcagctttcatgggaac
actgtctgccttccttccgaaacctctttcactgactcgccccagacgccttcgagcgaa
cgcgccagtgagggtgaatccgtcagtgtgtatgcctctggccagagcagcgaggacact
gccttctcttttcaggaatcaccaacttcgaaggacggacatcccagagatgcctcgtcg
gccggcagtgcacctgggaaggaaagcagggacggcggggacagggccccaaagtcacca
gatgctccagaggctcagtcggaggaggaagtagacgagctgtccctcattgaccacaat
gaaattatggcaaggctgacgctcaagcaagagggcgacgacggaccagacgtccgggga
ggatctggtgacatcctactggtccacgctactgagacggacaggaaagatctggtgttg
tactgcgaggccttcttgaccacctacaggaccttcatcacccctgaggagctcatcaag
aagctgcagtacaggtacgagaagttctctccttttgccgacacgttcaagaagcgcgtc
agtaagaacacgttcttcgtgctggtacgggtggtggacgagctctgcctagtggagttg
acggaagagatcttgaagctgctgatggagctggtctttcgcctggtgtgcaacggggag
ctcagtctggcccgtgtgctccggaagaacatcctggacaaggtggaccagaagaagctg
ctcaggtgtgccaactccgaccagcccctggcggccaggggcgtagcagccaggcccggg
accttgcatgactttcacagccacgagatagctgagcagctgacactgctggatgccgag
ctcttttataagatagagattcctgaggttttgctttgggcaaaagagcagaacgaggag
aagagccccaacttgacccagttcacggagcacttcaacaacatgtcctactgggttcgg
tcgatcatcatgttacaggaaaaggcccaagacagggaacggctgctcttgaagttcatc
aagatcatgaagcacttacggaagctgaacaacttcaactcctacctggccatcctctca
gcgctggactcggcccctatccgcaggctggagtggcagaagcagacctcagagggcctg
gcggagtactgcacgctgattgacagctcctcctccttccgcgcctaccgggccgccctc
tcggaggtggagccgccgtgcatcccatacctggggctcatcctgcaggacctcaccttc
gttcacctaggaaacccagactatattgacgggaaggtgaatttctccaaacggtggcaa
cagttcaacatcctggacagcatgcggtgcttccagcaggcgcattatgacatccggaga
aacgatgacatcataaacttcttcaacgacttcagtgaccacctggcggaggaggcgcta
tgggaactctctctgaaaatcaaacccaggaacataacacggaggaaaacagaccgggaa
gagaagacctag
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