Phocoena phocoena (harbor porpoise): 136124184
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Entry
136124184 CDS
T11058
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136124184 (NUP214)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136124184 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136124184 (NUP214)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136124184 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR19_1st
WD40_Prp19
dCache_2
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
136124184
NCBI-ProteinID:
XP_065734760
LinkDB
All DBs
Position
6:110295896..110396674
Genome browser
AA seq
2097 aa
AA seq
DB search
MGDEMDAVIPEREMKDFQFRALKKVRIFDSPEELPKERSNLLAVSNKYGLVFAGGASGLQ
IFPTKILLIQNKPGDDPNKIVDKVQSLLVPMKFPIHHLALSCDNLTLSVCMMSSEYGSII
AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVSSMVAVCLADGSIAVLQIT
ETVKVCATLPSTVGVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYEADHP
VRVLDVLWIGTYEFTIVYAAADGTLETAPDVVMALLPKKEEKHPEVFVNFMEPCYGSCTE
RQHHYYLSYIEEWDLVLAASAASTEVSILARQSSQSNWESWLLEDSSRAELPVTDKSDDS
LPMGVAIDYTNQVEITINDETTLPPAPVLMLLSTDGVLCPFYMINQNPGVRSLLRTPERL
SLEGERQPKSPGSTPTTPTSSQAPQKLDAAAAVAPASVLPSSPAAPTSTFSLPSAVGAPA
VFSFGSSSLKSSGSVTGEAPPCSSASDNSKAALGPGASSFSFVPPPQASLVLTPAASPMA
PSAASFSFGSSGFKPTLESTPVPSVSAPNTGMKPTFPPSASAVKVNLSEKFTAAATSAPV
HNSQSSPSMLPFSSVSKPASSGPLSHPAPLSASSGSLSSKSSVSSSLSGRSAQGSPSAVP
STVQKSPRITPPVAKSGSPQAKSLQPPVTEKQGHQWKESDPVMAGIGEEITHFQKELEEL
KARTSKACYQVGTSEEMRMLRTESDDLHTFLLEIKETTESLHGDISTLKTTLLEGFAGVE
EAREQNERNRDSGYLHLLYKRPLDPRSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHL
EQKKKQKRLFVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSQWGLPLDA
PSQSGTHSFDSDLESLRNALLKTTIDFQTKPLPKVAAKLSPVKQAQLRNFLAKRKTPPVR
STAPASLSRSAFLSQRYYEDLDEVSSTSSISQSLEGEDTRASCKDDDAVVQVPRHAPVVR
TPSIQPSLLPQATPFAKSHLIHGSPGVMGTSVSAPASKIIPQGADSTMLATKTVKHGAPG
PSHPISAPQAAAAAALRRQMASQAPAVSTLTESTLKNVPQVVNVQELKNNPTAPSAAMGS
SVPYSAAKTPHPMLTPASAHQAKQGSLINALKPSGPTPASSQLSSGDKASVATKIETAVT
STPSVVGQFSKSFSFSPSGTGFNFGIVTPTPSSNFTATQVAAPPGKESNQLDTFSFGGTG
KPFYEAVPESSPPSGMTTSSSMGAAGPSPGESAPSGGRPVAPSGIALSTPSGKVEAPPSK
LGELLFPSSLAGETLGSFSGLRVGQADDSTKAASKASSPGGTGASAQPTKTSAIPSGFSF
TGPVVLGKPAEPPVTSSVAATAVTLAAAAGPSPGSSSTGIFGSLPLTSAGPSSVISFAGL
SLSGSKTSFPFGGQQTSSTAPSSATAAATPLPTSLPALSFGSLLSSASAPTVPTSSSKST
EAATSSALPEKPGSSEALVSTASLLGQQPSAQLPQAPSQTSDSVKKEPALVQPVASSPGT
AAPSATVLAPSAEATPAATGAPDAKTEPPSPAPTPAAPGQIAVAAPAVPGAGPVAPETSR
PPATSSAVSGDAPGPATDPAVFGAVTSGSPVFTQPPAASSSSAFSQLTGHTATAPSATPM
FGQVAASTAPSLFGQQAGGIASTVAAAPQVSGSGFGSPAFGTSAPTVFGQTSFGQAPAFG
QPTSSPASGFSFSQPGFSSVPAFGQSASPTPASTSGNVFGASSSASSSSSFSFGQSSANT
GGGLFGQSSPPAFGQSPGFGQGSSVFGGTSATTTTAPSSGFSFCQASGFGSSNTGSLFGQ
AASTGGTVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGST
ATPNTSNLFGNSGAKTFGGFASSSFGDQKPAGTFSSGGGSVASQGFGFSTPSKTGGFGAA
PVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTT
SFGTLASQNAPTFGSLSQQSSAFGAQGAGFSAFGSGSGGFSFGSSSSSVQGFGGWRS
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaaatggatgccgtgatccccgagcgggagatgaaggattttcagtttaga
gccctgaagaaggtgagaatctttgactcccccgaggagttgcccaaggaacgctcgaat
ctgcttgccgtgtccaacaagtatggcctggtcttcgctggtggagccagtgggttgcag
atttttcctactaaaattcttcttattcagaataaacctggagatgatcccaataagata
gttgataaagttcagagcttgctagttcctatgaaattcccgatacatcacctggccctg
agttgtgataacctcacactttccgtgtgcatgatgtccagtgaatatggttccattatt
gctttttttgatgttcgcactttctcaaatgaggccaaacagcagaaacgcccgtttgcg
tatcataagctcctgaaagatgcaggaggcatggtgatcgatatgaagtggaaccctact
gtttcctccatggtggcagtttgcctggctgatggcagcattgctgtcctgcagatcaca
gagacagtgaaagtgtgtgcgactcttccttccacagtgggagtaacatctgtctgctgg
agccccaaaggaaagcagctggcagtggggaaacagaatggaactgtggtccagtatctt
cctactttgcaggagaaaaaagtcattccttgtcctccattttatgaggcagatcatcct
gtcagagttctggatgtgctgtggatcggtacatatgaattcacaatagtatatgctgct
gcagacgggaccttggaaactgctcccgatgtggtgatggctctactcccgaaaaaagaa
gaaaagcacccagaagtgtttgtgaactttatggagccctgctacggcagctgtacagag
aggcagcatcattactacctcagctacattgaagaatgggatttagtgctggcagcatct
gcggcttcaacagaagttagtatccttgctcgacaaagcagccagagtaattgggaatct
tggctgctggaggattctagccgagctgaactgcctgtgacagacaagagtgatgattcc
ttgcccatgggagttgccatagattacaccaaccaagtggaaatcaccatcaacgatgag
acgactcttcctcctgctccagttcttatgttactttcaacagatggtgtgctttgtcca
ttttacatgatcaatcaaaatcctggtgttaggtccctcctcaggacaccagagcggctc
tcattggaaggagagcgacaacccaagtcaccaggaagtactcccactactcccacctcc
tctcaggccccgcagaagctcgatgcggcagcagccgtagctcctgcctccgttctgcct
tcatcaccggctgctcccacctccaccttctctttgccttccgcagtgggagcccctgct
gtgttctcctttggttcttcatccttgaagtcatctggttctgtcactggggaggcccct
ccgtgttccagtgcctctgacaattccaaagcagccttgggccctggagcatcctccttc
tcttttgttcctcctcctcaagcctccctcgtgctcacccctgcggcctctcccatggca
ccctcagctgcctcattctcctttggatcatcgggttttaagcctaccctggaaagcacg
ccagtgccaagcgtgtctgctccaaacacaggaatgaagcccaccttcccaccatcagcc
tctgcagtgaaggtcaaccttagcgaaaagttcacggccgcggccacctctgctcctgtt
cacaactcacagagctcaccctcaatgctgccgttctcctcggtctccaagccagcatcc
tctggacctctcagccaccctgcacctctctcggcatcatccggttccttgtcatccaag
tcctcagtctcttcctcgctatcggggcggtctgctcagggtagtccaagtgcagtgccg
tcaacggtacagaaatcacccaggataacccctccggtggccaagtcaggctctccccag
gcaaaatcacttcagcctcctgttacagaaaagcagggacatcagtggaaagagtcagac
cctgtgatggctggaatcggggaggagatcactcactttcagaaggagttggaagagctg
aaagcccgaacttccaaagcctgttaccaagtgggcacttctgaggagatgaggatgctg
cgaacagaatcagatgacctgcacacctttcttttggagattaaagagaccacagagtct
cttcatggagatataagtaccctgaaaacaactttacttgagggctttgctggtgttgaa
gaagccagagaacaaaatgagagaaaccgtgactctgggtatctgcacttgctctataag
aggccgctggaccccaggagtgaggctcagctccaggaaattcggcgccttcatcagtat
gtgaaatttgctgtccaagatgtgaatgatgttctagacttggagtgggatcggcatctg
gaacaaaagaaaaaacaaaagcgcctgtttgtgccagagcgagagacactgtttaacacc
cttgccaacaaccgggaaatcatcaaccaacagaggaagaggctgaatcacctggtggat
agtctccagcagctccgtctttataaccagacctcccagtggggccttcccttggatgcc
ccctctcagagcggcactcacagttttgacagtgacctcgaaagcctgcgcaatgctttg
ttgaaaaccaccatagactttcaaaccaaacccttgcccaaagtcgcagctaaactgtcc
cccgtgaaacaggcacagctgagaaacttcttggccaagaggaagaccccaccggtgaga
tctactgctccagccagcctgtctcggtcagctttcctgtctcagaggtattatgaagac
ttggatgaagtcagctcaacgtcatccatttcccagtctctggaaggtgaagacacacgg
gcatcctgtaaggatgacgacgcagtggtccaggttccccggcatgctcccgtggttcgg
acgccttccatccagcccagtcttttgccccaggcgactccttttgctaaatctcacctg
attcatggttcaccaggtgtgatgggaacttcagtgtctgcacctgctagcaaaattatt
ccccaaggggctgatagcacaatgcttgcaacaaaaaccgtgaagcatggcgcccctggc
ccttcccaccccatctctgctccccaggcggccgctgcagcagccctgagacggcagatg
gccagtcaggcgccagctgtcagtactttgaccgaatcaactttgaagaatgtccctcaa
gtggtaaatgtgcaggaattgaagaataatcctacagccccctctgcagcgatgggttct
tcagtgccgtactccgcagccaaaacacctcacccgatgttgaccccagcgtctgctcac
caagctaagcagggatctctgataaacgccttaaagccgtctgggcccacaccagcgtcc
agtcaattgtcatctggtgataaagcatcagtggcaaccaagatagagacagctgtgacg
tctaccccatctgttgttgggcagttcagcaagtctttctcattttctccgtcagggact
ggctttaattttgggatagtcacaccgacaccgtcttctaatttcacggccacacaagtg
gcagcaccccccggcaaagagtcaaaccagctggacacattctcctttggcgggacaggc
aaacctttttacgaggccgttcctgaaagctcacctccctcgggaatgacgacgtcaagt
agcatgggagccgctggtccctctcctggggagtctgctccatccggcggcaggcccgtg
gcaccttctggaattgctctttccaccccctctggcaaggtggaagctccgccgtccaag
ttgggagagctcctgtttccaagttctctggctggagagactctaggaagtttttcagga
ctgcgggttggccaagcagatgattctacaaaggcagccagtaaggcttcatccccaggc
gggactggtgctagtgcacagcccaccaagacttcggccatcccctccgggtttagtttc
accggccccgtggtgctggggaagcccgcggagcctcccgtgacctcctctgtggctgcc
accgcagtgaccctggcggctgcggccggccccagccccggcagttcctcgacaggcatc
tttggcagcctgccgctcaccagtgcgggaccctccagcgtaatcagttttgcggggcta
tcgctaagcggtagcaagacgagttttccgttcggaggccagcagacaagtagtacagcg
ccgtcctctgccactgccgctgccacaccccttcctacatccctccccgccttgtcgttt
ggcagcctcctgagttcagcatctgctcccaccgtgcccacgtcctccagtaaaagcacg
gaagcagccacgtcatcggctctgcctgagaagccaggtagtagtgaggccttagtgtca
acagcctccctcctagggcagcagccatccgcccagcttccccaggctccttctcaaacg
tctgactctgtgaagaaggagcccgctctcgtccagcctgtggccagcagccctggtaca
gcggcgcccagtgccaccgtcctagcgccgtccgctgaggccactccggcagccaccggg
gccccggacgccaagaccgaaccgccgtcccctgccccaaccccggcagcacctgggcag
attgccgtcgcagcacctgccgttccaggtgccggccccgtggccccggaaacatccagg
cctcccgccacctccagcgctgtttccggtgatgctccaggcccagccacggatcccgca
gtgtttggggcggtcacttcgggctcgcctgtctttactcagccgccggccgccagctct
agctcggctttcagccagctcactggccacacagccactgccccctcggcgacccccatg
tttggacaggtggctgccagcactgccccgagcctgttcggacagcaggcaggcggcatc
gccagcacggtggctgccgcgccgcaggtcagcggctcggggttcggcagcccagcgttt
ggcacctccgccccgacggtctttggacagacgagcttcgggcaggccccggccttcggg
cagccgaccagcagccccgcgagcggcttttccttcagtcagcccggcttcagctccgtg
ccggcttttggtcagtccgcgtcccccacccccgcgtccaccagcgggaacgtgttcggt
gcatcttcaagcgccagtagctccagctccttctcatttggacagtcttctgccaacact
ggaggagggctctttggccagagcagccctcctgcctttggccaaagtcctggctttggg
cagggaagctctgtgttcggtggcacctcagccaccaccacgacagcgccatcctctggg
tttagcttttgtcaagcttcaggttttgggtctagtaatactggttctttgtttggtcaa
gcagccagtactggtggaacagtctttggccagcagtcgtcctcttccagtggcagcgtg
tttgggtctggaaacactggaagagggggaggtttcttcagtggccttggagggaaaccc
agccaagatgcagccaacaaaaacccattcagctcggccagcgggggctttggatctaca
gccaccccaaatacctctaacctttttggaaacagtggagccaagacgtttggcggcttt
gccagctcatcatttggagaccagaaacctgctggcacctttagctctggaggaggaagt
gtggcctcccaaggctttgggttttccactccaagtaaaacaggtggcttcggtgctgct
ccagtgtttggcagccctcctacttttgggggatcccctgggtttggaggggtgccagca
ttcggttcagccccagcctttacaagccctctgggctcgacgggaggcaaagtgttcgga
gagggtaccgcggccgccagcgcgggaggattcgggttcgggagcagcagcaacaccacg
tccttcggcaccctcgccagtcagaacgccccaacgttcggatcgctgtcccaacagtcc
tctgcgttcggggcccagggcgcgggattctccgccttcgggtcaggcagcggaggattc
agctttggatcatctagctcgtctgtccagggctttggtggctggagaagctga
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integrated database retrieval system
