Phocoena phocoena (harbor porpoise): 136124254
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Entry
136124254 CDS
T11058
Symbol
RNF115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136124254 (RNF115)
04121 Ubiquitin system [BR:
pphc04121
]
136124254 (RNF115)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136124254 (RNF115)
Membrane trafficking [BR:
pphc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136124254 (RNF115)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136124254 (RNF115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
Zn_ribbon_19
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
HypA
zf-Nse
DZR_2
C1_2
zf-RING_6
DUF7560
Zn_ribbon_PaaD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
136124254
NCBI-ProteinID:
XP_065734877
LinkDB
All DBs
Position
1:complement(107739263..107798529)
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AA seq
293 aa
AA seq
DB search
MAEASAAGAGAGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESGFIEEMTDDSSFLGGGS
STSTHFAEFWDHLDPTMFFQDFRPFLSSSLLDQDNRANERGHQTHTDFWGPSRPPRLSVT
QRYRSRGSTRPDRSPAFERVLQQIIAGFIPGSPFSWSGMLHSNPGDYAWGQTGLDAIVTQ
LLGQLENTGPPPADKEKITSLPTVTVTREQVDKGLECPVCKEDYTVEEEVRQLPCNHFFH
SSCIVPWLELHDACPVCRKSLNGEDSTQQTQTSGSSASNRFSSDSQLHDRWTF
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcctcggcggccggggccggcgcgggcgccgcggttgccgcgcaccggttt
ttctgccacttttgcaagggcgaggtcagccccaaactaccggaatatatttgtcccaga
tgtgaatcaggctttattgaagaaatgacagatgattccagttttttaggtggtggcagc
agcacatcaacacattttgcagagttctgggaccatttggaccccacgatgtttttccaa
gattttagaccctttctaagtagcagtctattggaccaagataatagagccaatgagagg
ggtcaccaaactcacactgacttctggggaccaagtcggccgccacggctgtcagtgact
caaagatacagatctcgaggaagtactcgtcctgatagatcccctgcttttgaaagagta
ctacaacaaatcattgcaggattcattcctggatccccgttttcttggagcgggatgctg
cactccaaccctggggactatgcctggggtcagacagggcttgatgccattgtaactcag
cttttaggacaactggaaaacacagggcctcccccagctgacaaggaaaagatcacatct
cttccaacagtgacagtaactcgggaacaagttgataagggtttagagtgtccagtatgc
aaagaggattacacagttgaggaggaagtccggcagttaccctgcaaccacttctttcac
agcagttgtattgtgccgtggttagaactgcacgacgcatgtcctgtatgtaggaagagc
ttaaatggtgaggactctactcagcaaacccagacctctgggtcctctgcaagcaacaga
tttagcagtgacagccagctacatgaccgatggactttctga
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