Phocoena phocoena (harbor porpoise): 136124269
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Entry
136124269 CDS
T11058
Name
(RefSeq) interferon omega-1-like
KO
K05440
interferon omega
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04060
Cytokine-cytokine receptor interaction
pphc04622
RIG-I-like receptor signaling pathway
pphc04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
136124269
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
136124269
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
136124269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pphc04052
]
136124269
Cytokines and neuropeptides [BR:
pphc04052
]
Cytokines
Interferons
136124269
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Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
136124269
NCBI-ProteinID:
XP_065734894
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Position
6:45653499..45654086
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AA seq
195 aa
AA seq
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MAFVLSLLTALVMFSYGPGGSLGCDLSQNHVWISKKNFMLLGQMRRISPRFCLKDRKDFG
FPQDMVDDSQLPKAQATSVLHEMLQQTFRLFHTARSPAAWDTSLLDKLCTGLHQQLEDLD
ACLVQAMGDEETALGVTGSTLAVKRYFQGIHLYLKEKKYSDCAWEIVRVEIMRSLSSSTN
LQERIRIMDGDLGSP
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgtgctctctctactgaccgccctggtgatgttcagctacggccctggtgga
tctctgggctgcgacctgtctcagaaccacgtgtggattagcaagaagaacttcatgctt
ctgggccagatgcggagaatctcccctcgtttctgtctgaaggacagaaaagacttcggt
ttcccccaggacatggtggatgacagccagctcccgaaggcccaggccacctctgtcctc
cacgagatgctccagcagaccttccgcctcttccacacagcgcgctcccctgccgcctgg
gacacctccctcctggacaaactctgcactggactccatcagcagctggaggacctggac
gcctgcttggtgcaggcgatgggagatgaagaaactgccctgggagtgacaggctctaca
ctggccgtgaagaggtacttccagggaatccacctctacctgaaagagaagaaatacagt
gactgtgcctgggaaattgtcagagtggaaatcatgagatccttgtcttcatcgaccaac
ttgcaagaaaggataagaattatggatggagacctggggtcaccttga
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