Phocoena phocoena (harbor porpoise): 136124370
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Entry
136124370 CDS
T11058
Symbol
GTF3C5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136124370 (GTF3C5)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
136124370 (GTF3C5)
TFIIIC, fungi type
136124370 (GTF3C5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
DUF4611
Motif
Other DBs
NCBI-GeneID:
136124370
NCBI-ProteinID:
XP_065735109
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All DBs
Position
6:111897195..111911773
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AA seq
520 aa
AA seq
DB search
MAAADWGSGVAVPVELRRERHIVCVEYPGVVRDVSKMLQTLGGEEGVSRIYADPTKRLEL
YFRPKDPYCHPVCANRFSASSLLLRIKRKMRRQRGAPGPEAPPKVTFDIESLGIVSTVYK
FQGMSDFQYLAVHTEAGGRHMSMYSKVLMVKPEKENFFHQELPLYIPPPIFSRLDTPVDY
SYRPETQHREGYNNPSISGENLIGLSRARRPHNAIFVNFEGDEVPEQPLEAAAQTWRKVC
TNPVDHKVEEELRKLFEIRPIWSRNAVKANISVHPDKLKVLLPFMAYYMITGPWRSLWIR
FGYDPRKHPDAKIYQVLDFRIRCGMKYGYAPSDMPVKAKRSTYNYSLPITVKKTSSQLVT
MQDLKQGLGPSGSASARKLASNKYKLKDSVYIFREGALPPYRQMFYQFCDLNVDELQEII
HRNDGAESLCTERDGWCLPKTSDDLRDVMSLMIRHTIRSKRPALFSSPAKADDGKEQLTC
GSGDEDAEDAEDEDDEDDEDDFKPSDGSENEMETEILDYV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagactggggttcgggggtcgccgtccctgtggagctgcggcgcgagcgg
cacatagtgtgtgtggagtacccgggcgtggtgcgcgacgtgtccaagatgctgcagacc
ctgggcggcgaggaaggcgtctctcggatctatgcagaccccactaagaggctggagctg
tacttccggcccaaggacccttactgccaccccgtgtgtgccaaccgcttcagtgccagc
agcctgctgctccggatcaagaggaagatgaggcggcagaggggggcgccggggcctgag
gctccccccaaggtcacgttcgacatagagagccttggcatcgtctccaccgtttacaaa
tttcaaggaatgtccgacttccagtacctggccgtgcacacggaggcgggtggcaggcac
atgtccatgtacagcaaggtgctcatggtcaagcccgagaaggagaatttcttccaccag
gagctgccgctctacatccccccgcccatcttctccaggctggacaccccggtggactac
tcctaccgcccagagacacagcaccgggaaggctacaacaacccctccatctccggggag
aacctgatcggcctgagcagggcccggcgccctcacaatgccatcttcgtcaacttcgag
ggggatgaggtacccgagcagccgctagaggctgcggcccagacctggaggaaggtgtgc
accaaccccgtggaccacaaggtggaggaggagctgaggaagctgtttgaaatccgcccc
atctggtcacgtaacgctgtcaaggccaacatcagcgtccaccccgacaagctgaaggtc
ttgctgcccttcatggcctattacatgataacaggcccctggaggagcctgtggattcga
ttcgggtacgacccccgaaaacacccagacgccaagatttatcaagtccttgacttccga
atccgttgtggaatgaaatacggttacgcccccagcgacatgcccgtcaaggccaagcgc
agcacctacaactacagcctccccatcaccgtcaaaaaaacgagcagccagctcgtcacc
atgcaagacctgaagcagggcctgggtccctccgggtcggccagtgcacgcaagttggcc
tccaacaagtacaagctcaaggactcggtctacatcttccgggagggggccttgccaccg
taccgacagatgttctaccagttttgcgacttgaacgtggacgagctgcaggagatcatt
caccgcaatgacggcgctgaaagtctctgcacagagcgggacggctggtgcctccccaag
accagtgacgacctgagggacgtgatgtccctcatgatccggcacaccatccgctccaag
aggcctgctctcttctccagcccagccaaagctgacgacgggaaagaacagctgacctgc
ggatctggggacgaggacgcagaggacgcggaggatgaggacgacgaggacgacgaggac
gacttcaagccgtcggacgggagcgagaacgagatggagacggaaattctggactacgtg
tga
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