Phocoena phocoena (harbor porpoise): 136124416
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Entry
136124416 CDS
T11058
Name
(RefSeq) interferon alpha-1-like
KO
K05414
interferon alpha
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04060
Cytokine-cytokine receptor interaction
pphc04151
PI3K-Akt signaling pathway
pphc04217
Necroptosis
pphc04620
Toll-like receptor signaling pathway
pphc04621
NOD-like receptor signaling pathway
pphc04622
RIG-I-like receptor signaling pathway
pphc04623
Cytosolic DNA-sensing pathway
pphc04630
JAK-STAT signaling pathway
pphc04650
Natural killer cell mediated cytotoxicity
pphc04936
Alcoholic liver disease
pphc05152
Tuberculosis
pphc05160
Hepatitis C
pphc05161
Hepatitis B
pphc05162
Measles
pphc05163
Human cytomegalovirus infection
pphc05164
Influenza A
pphc05165
Human papillomavirus infection
pphc05167
Kaposi sarcoma-associated herpesvirus infection
pphc05168
Herpes simplex virus 1 infection
pphc05169
Epstein-Barr virus infection
pphc05170
Human immunodeficiency virus 1 infection
pphc05171
Coronavirus disease - COVID-19
pphc05200
Pathways in cancer
pphc05320
Autoimmune thyroid disease
pphc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
136124416
04151 PI3K-Akt signaling pathway
136124416
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
136124416
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
136124416
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136124416
04621 NOD-like receptor signaling pathway
136124416
04622 RIG-I-like receptor signaling pathway
136124416
04623 Cytosolic DNA-sensing pathway
136124416
04650 Natural killer cell mediated cytotoxicity
136124416
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136124416
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
136124416
05161 Hepatitis B
136124416
05160 Hepatitis C
136124416
05171 Coronavirus disease - COVID-19
136124416
05164 Influenza A
136124416
05162 Measles
136124416
05168 Herpes simplex virus 1 infection
136124416
05163 Human cytomegalovirus infection
136124416
05167 Kaposi sarcoma-associated herpesvirus infection
136124416
05169 Epstein-Barr virus infection
136124416
05165 Human papillomavirus infection
136124416
09171 Infectious disease: bacterial
05152 Tuberculosis
136124416
09163 Immune disease
05320 Autoimmune thyroid disease
136124416
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
136124416
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
136124416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pphc04052
]
136124416
Cytokines and neuropeptides [BR:
pphc04052
]
Cytokines
Interferons
136124416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
CoV_NSP2_N
Motif
Other DBs
NCBI-GeneID:
136124416
NCBI-ProteinID:
XP_065735197
LinkDB
All DBs
Position
6:45564693..45565262
Genome browser
AA seq
189 aa
AA seq
DB search
MAPTVSLLLALVLLSCNSNCSLGCDLPQTHSLTNTRALMLLQQMRRISPFSCLKDRNDFG
FPQDAFGGNQFQKAQAIAVVHEMIQQTFQLFSTEGSAAAWDETLLDKFCTALYQQLTDLQ
ACLMQEAGPEGTPLLKEDSILAVRKYFHRITVYLQEKKYSPCAWEIVRAEVMRSFSSSTN
LQESLRRKE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaccgtgtccttactcctggccctggtgctactcagctgcaactccaactgc
tctctgggctgcgacctgcctcagacccacagcctgacgaacacgagggccctgatgctc
ctgcaacaaatgaggagaatctcccccttctcctgcctgaaggacagaaatgactttgga
ttcccccaggacgcgtttggaggcaaccagttccagaaggctcaagccatcgctgtcgtc
catgagatgatccagcagaccttccagctcttcagcacagagggctcggctgccgcttgg
gatgagaccctcctggacaagttctgcactgcactttatcagcagctcactgacctgcaa
gcctgtctgatgcaggaggcggggccggaagggactcccctgctgaaggaggactccatc
ctggctgtgaggaaatacttccacagaatcactgtctatctgcaagagaagaagtacagc
ccttgtgcctgggagattgtcagagcagaagtcatgagatccttctcttcatcaacaaac
ttgcaagaaagcctcaggaggaaggaatga
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