KEGG   Phocoena phocoena (harbor porpoise): 136124432
Entry
136124432         CDS       T11058                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49 isoform X1
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    136124432 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pphc03021]
    136124432 (POLR1E)
Transcription machinery [BR:pphc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     136124432 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49 DUF6675
Other DBs
NCBI-GeneID: 136124432
NCBI-ProteinID: XP_065735213
LinkDB
Position
6:80273099..80299802
AA seq 422 aa
MAAEVLPSARWLYCGEPDESQRALLVQFSNGKLQNPGNMRFTLYKSNDSTNPRKRSQRIL
AAETDRLYYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQPLFSDESVQS
ESTLESHTKSFREKMDSCIEAFGTTKQKRALNSRRMNKVGSESLNSAVAKAAESIIDTKG
VTALVSDAIHDDLQDDSLYLPPCHADAAKPEDVYKFEDLLSPAEYDALQSPSEAFRNVTS
EEILKMIEENSHCSFVIEALKSLKSLPSSEESRDRQARCIWFLDTLIRFRAQKVIKRKRA
LGPGVPHIINTKLLKHFTCLIYNNGSLRNLISDSMKAKITAYVIILALHINDFQIDLTVL
QRDLKLSEKRMMEIAKAMRLKISKRRVSLAVGREEDHKLGTLSIPLPPAQALDRQSKRRK
IT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcggcggaggtgttgccgagtgcgaggtggctgtactgtggagagcccgacgagagc
cagagagctctactggtccagttctccaatgggaagctacagaatccaggcaacatgcgt
tttaccttgtacaagagcaatgattccacaaaccccaggaagaggagtcagcggatcctg
gcagctgaaacagacagactttactatgtgggaaacaattttgggactggagccctgaaa
tgcaacactctctgcaggcactttgtgggaattttgaacaagacctctggccaaatggaa
gtatatgatgctgaattgttcaatatgcagccactgttttccgatgaatcagttcagagt
gaatcgacactagagagtcacaccaaatcttttagagaaaagatggattcttgcattgaa
gcctttggtaccaccaaacagaagcgggctctgaactccaggagaatgaacaaagttggc
agtgaatctttgaatagtgcagtggctaaagctgcagagagtataattgatacaaagggt
gtgactgccctggtcagtgacgccatccacgatgacttgcaggatgactccctctacctc
cctccctgccatgctgatgcagccaagcctgaagacgtgtataaatttgaagaccttctt
tcccctgcggagtatgacgctcttcagagcccttctgaagctttcaggaatgtcacctca
gaagaaatactgaagatgattgaagagaacagtcactgctcctttgtcatagaagcgttg
aagtctttgaagtctttgccatcaagtgaggagagccgagaccgccaggcccggtgcata
tggtttctggacactctgatcagatttcgagcacagaaagtgattaagcggaaacgtgcc
ctgggacctggagttccccacatcattaacaccaaactgctgaagcactttacctgcttg
atctacaacaatggcagtttgcggaacttaatttcagactcaatgaaggcaaagatcacc
gcctatgtgatcatactggctttgcacataaacgacttccagattgacctgacggtgtta
cagagggacttgaagctcagtgagaaaaggatgatggagatagcgaaagccatgaggctg
aagatctctaaaagaagggtttctctggcagtgggcagggaggaggatcacaaactgggc
accctctccatcccactgcccccagcccaggccttggaccgtcagtcaaagcggaggaaa
atcacctag

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