Phocoena phocoena (harbor porpoise): 136124520
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Entry
136124520 CDS
T11058
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136124520
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136124520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136124520
03041 Spliceosome [BR:
pphc03041
]
136124520
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136124520
mRNA cycle factors
Common to processing body (P body) and stress granule
136124520
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136124520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136124520
NCBI-ProteinID:
XP_065735335
LinkDB
All DBs
Position
1:106683311..106684264
Genome browser
AA seq
275 aa
AA seq
DB search
MRDPNTKRSRGFRFVTYATVEEVDVVMNARPHKVDGSVVEPKRAISREDSQRPGVHLTVK
KIFVRGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGIKRGFAFVTFDDHDSVDKIVIP
KYHNVNGHNCEVRKALSKQETASASSSQRGRSGSGNFGGGRGGGFGGNDNFGHGGNFSGQ
GDFGGSHGGGGYGGSGDDYNGFGNDGSNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGRS
SGPCGGGGQYFAKPRNQGGYCGSSSSSSYGSGRRF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagggatccaaacaccaaacgttccagaggcttcaggtttgtcacatatgccactgtg
gaggaggtggatgtggtcatgaatgcaaggccacacaaggtggatggaagtgttgtggaa
ccaaagagggccatctcaagagaagattctcaaagacctggtgtccacttaactgtgaaa
aagatttttgttcgtggcattaaagaagacactgaagaacatcatctaagagattatttt
gaacagtatgggaaaattgaagttattgaaatcatgactgatcgaggcagtggcataaag
agaggctttgctttcgtaacctttgatgaccatgactctgtagacaagattgtcattccg
aaataccataatgtgaacggccacaactgtgaagtaaggaaagccctatctaagcaagag
acggctagtgcctcatccagccaaagaggtcgaagtggttctggaaactttggtggtggt
cgtggaggtggttttggtgggaatgacaactttggtcatggaggaaatttcagtggtcaa
ggtgactttggtggcagccatggtggtggtggatatggtggcagtggggatgactataat
ggatttggtaatgatggaagtaattttggaggtggtggaagctacaatgattttggcagt
tacaacaatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagt
tctggcccctgtggtggtggaggccaatactttgccaaaccccgaaaccaaggtggctat
tgcggttccagcagcagcagtagctatggaagtggtagaaggttttga
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