Phocoena phocoena (harbor porpoise): 136124528
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Entry
136124528 CDS
T11058
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136124528 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136124528 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
pphc03016
]
136124528 (ZCCHC7)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
136124528 (ZCCHC7)
Transfer RNA biogenesis [BR:
pphc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
136124528 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
136124528
NCBI-ProteinID:
XP_065735342
LinkDB
All DBs
Position
6:79918321..80157101
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AA seq
547 aa
AA seq
DB search
MMFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLDNVIKEEEHEEKNSG
NSESFNSKPNQKNLIILSDSEVIQLSDGSEVITLSDEDSIYKCKRKNFRVHAEEKTQGPP
AFLHSNELADKKCKRDIEKTKPGERSGTIQEVMIIEVSSSEEEESTISESDNVESWMLLG
CEVDDKDDDILLNLVGCENSLNEGEDGVNWFISDKDVEAQIGKKRTSGRWAHRYYSVNKN
VTCRNCDKCGHLSKNCPFPQKVRSCCLCSERGHLQYACPARFCLDCSLPMSSTHRCLERS
SWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCGQEGHYG
HECTERRMFNQTFPTSPFIYYYDDKYEIRERDQRIKRKVKELQKNGDFPRQFKRPHMEAA
DKRPHCDMRKSRASWRSNTWPQEKKETQKEAMNRTSREREKHRKADRCHEVDEDYPRGPR
VHSSPGTVKTQKPYKTFHRSLHYHKPSEDGLPREGRRVRHKKKESCLEDDDNDNLFLIKQ
RKKKSKL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggtggttatgagaccatagaagcatatgaagatgacctttatcgtgaagag
tcatctagtgaactgagtgttgatagtgaggtggaatttcagctctacagccaagttcat
tatgcccaagatcttgataatgtcatcaaagaggaagaacatgaagagaagaactctggg
aattctgaatcattcaatagtaaaccaaatcagaagaacttaattatcctttcagatagt
gaggtcatccagctatcagatgggtcagaggtcatcacactgtctgatgaagatagtatt
tataaatgtaaaagaaagaattttagagtccatgcagaagaaaagacccaaggtcctcct
gcttttcttcattctaatgagttggcagataagaaatgcaagagggatattgagaagact
aaacctggagagagatcaggtacaatccaagaggtcatgattatagaggtcagttcaagt
gaagaggaagagagcaccatttcagaaagcgataatgtggaaagctggatgctgctggga
tgtgaagttgatgataaagatgacgatatccttctcaatcttgtggggtgtgaaaattct
cttaatgaaggagaagatggtgtaaactggttcatcagtgacaaagacgttgaggcacag
ataggtaaaaaaagaacatctggaagatgggcccaccgctactattcagtcaacaaaaat
gttacctgtagaaattgtgacaaatgtggccatttgtcaaaaaactgcccctttccacaa
aaagtccgctcctgttgcctctgctccgagagaggacacctccagtatgcctgtccggcc
cgcttttgcttagactgttctttgcctatgtcttctactcacagatgtcttgaaagatct
tcctggagaaaacggtgtgacagatgtgatatgataggccactatgctgatgcttgccca
gaaatctggaggcagtatcacctaacgaccaaacctggaccacccaaaaagccaaagacc
ccttctggacaatcagccttagtgtattgctacaactgcgggcaagaaggccattacgga
catgaatgtacagaaagacgaatgtttaaccagacctttccaacatctccattcatctac
tactatgatgacaaatatgaaatccgggagagagatcagagaataaaacgaaaagtgaaa
gaacttcagaagaatggggactttccaaggcagttcaagaggcctcatatggaagcagca
gataagaggccccactgtgatatgaggaagagccgtgcctcatggagaagtaacacgtgg
cctcaagaaaagaaagagacccaaaaagaagccatgaacaggaccagcagagagcgtgag
aagcacaggaaggctgacaggtgtcatgaagtggatgaggactaccccaggggccccaga
gtccactcttctcctggcactgtcaaaacccagaagccttacaagacctttcaccgctca
ttgcattaccacaagccaagtgaagacgggctgcccagagagggcaggagggtcaggcat
aagaaaaaggagagctgtttggaggatgatgacaatgataatttatttctcattaagcag
aggaaaaaaaagtctaagctgtga
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