Phocoena phocoena (harbor porpoise): 136124540
Help
Entry
136124540 CDS
T11058
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04151
PI3K-Akt signaling pathway
pphc04510
Focal adhesion
pphc04512
ECM-receptor interaction
pphc05165
Human papillomavirus infection
pphc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
136124540 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136124540 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136124540 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
136124540 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
136124540 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pphc00536
]
136124540 (TNC)
Glycosaminoglycan binding proteins [BR:
pphc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136124540 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
DUF4998
fn3_2
YPEB_PepSY1-2
EGF
Motif
Other DBs
NCBI-GeneID:
136124540
NCBI-ProteinID:
XP_065735353
LinkDB
All DBs
Position
6:complement(96547971..96642424)
Genome browser
AA seq
2201 aa
AA seq
DB search
MGVVTRLLAGIFLALLALPAEGGVLKKVIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLVPLSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELENLVSSLREQCTLGAGCCFQPAEGHLDTKPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDKGFTGEDCGQLACPSDCNDQGKCMNGTCVCFE
GYSGVDCSQEPCPVPCSEEHGRCVDGRCVCQDGFAGEDCNEPLCLHNCHGRGSCVENECV
CDEGFTGDDCGELVCPNDCFDRGRCVNGTCYCDEGFAGEDCGQLACPNACHGRGRCDEGQ
CVCDEGFAGADCSEKRCPSDCHDRGRCLDGHCECDDGFTGADCGELRCPRDCSGHGRCVN
GQCVCDEGRTGEDCGQLRCPNDCHGRGRCVQGLCECELGFQGYDCGEMSCPHDCHQHGRC
LNGMCICDDAYMGEDCRELRCPRDCSQRGRCVDGRCVCEDGFAGPDCADLSCPGDCHGRG
RCVDGQCVCHEGFTGKDCGQRRCPDDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYAGEDCSQVSPPKDLIVTEVTEETINLAWENEMRVTEYLIVYTPTH
EDGLEMQFRVPGNQTSTTIQELEPGVEYLIRVFAILENKKSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPVDIAFETWEVIFRNMNKEDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPSLKRVTTTRLDAPSQIEVKDVTDTTALITWSKPLAEIDSIELTYGIK
DVPGDRTSIDLTHEENQYSIGNLKPDTEYEVSLISHRADMSSSPARETFTTGLDAPRNLR
RISQTDNSITLEWRNVKAAADSYRIKYAPISGGDHAEVEVPRRQQTTTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATVNAATDLDAPRDLRVSEPTETSLTLLWQTPLAKYDRYRLNYS
LPSGQPVEVQLPRGTTSYVLKGLEPGQEYTILLTAEKGRHKSKPARVQASTDHAPEMEKL
TVTEAGWDGLKLNWTTADQAYEHFVIQVQEANRVEAAQNLTVPGSLRAADIRGLKAATPY
RVTIYGVIRGYRTPMLSAEASTGEAPHLGEVTVSEVGWDALKLHWTAPEGAYEQFLIQVQ
ETDTEEAAQNLTVPGGLRSVDLPGLKADTHYSVTIRGVTRDFSTTPLSVEVLTEEVPDLG
NLTVTEVSWDALRLDWTSPDGIYEQFVIEIQEADQTQEAHSLTVPGSLCSVEIPGLRAGT
PYTITLRGEVRGRSTQPLAVEVITAELPQLGHLAVTEAGWDGLKLNWTTADQAYEHFVIQ
VQEANRVEAAQNLTVPGSLRAADIRGLKAATPYRVTIYGVIRGYRTPMLSAEASTAGEPE
IGNLNVSDITPESFNLSWTATDGAFKTFTIEIIDSNRFLETMEYNISGAERTAHISGLRP
NNDFIVYLSGLTPSIRTKTISATATTEALPLLENLTISDINPYGFTVSWMALKNAFDRFL
VTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEAE
PEVDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLAPERTRDITGL
REATEYEIELYGISRGKLSQPVSAIATTAMGSPKEIVFSDITENSATVSWKAPTTQVESF
RVTSVPTAGGTPSVVTVDGTKTQTRLLRLLPGVEYLVSVIALKGFEESTPVSGMLTTALD
GPSGLVTANITDSEALAMWQPAIAPVDNYVISYTGEREPETTRKVSGNTVEYALTNLEPA
TEYTLRIFAEKGPQKSSTITTKFMTDLDSPRDFTATEVQSETAILTWRPPRASVTGYLLV
YESVDGTTKEVVVDPDTTSYSLAELSPSTHYMAKIQALNGPLRSKIIKTTFTTTGVLYPF
PRDCSQAMLNGDTTSGVYTVYLNNDKTQKQEVFCDMTSDGGGWIVFLRRKNGREDFYRNW
KAYTAGFGDLKEEFWLGLDTLNKITAQGQYELRVDLRDHGQSAYAVYDKFSVGDARTRYR
LKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGD
NNHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgtgactcggctgttggcaggcatcttcctagctctgcttgcccttcctgcc
gaaggtggcgtcctcaagaaagtcatccggcacaagcgacagagtggggtgaatgtcacc
ctgccagaggagaaccagccggtggtgtttaatcacgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggatctggaatcagccagtggggagaaagacttggtcccactg
tcagagcccagggagagcttccaggagcacacggtagatggggaaaaccagatcgtcttc
acacaccgcatcaacatcccccgccgggcctgtggttgtgccgctgctcctgacatcaag
gagcttctgagcagactggaggagctagagaacctggtgtcttccctgcgggagcagtgc
accttgggagcaggctgctgcttccagcctgccgaaggccacctggacaccaaacccttc
tgcagcggccggggcaacttcagcactgaaggctgtggctgtgtgtgtgaaccgggctgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctgcgaggccagtgc
ctggacgggcagtgcgtgtgtgacaagggcttcacgggggaggactgcggccagctggcc
tgccccagcgactgcaatgaccagggcaagtgcatgaacgggacctgcgtctgcttcgaa
ggctattcgggggtggactgcagccaggagccctgcccggtgccctgtagcgaggagcac
ggccgctgcgtggacggccgctgtgtgtgccaggacggcttcgccggcgaggactgcaac
gagcccctgtgtctgcacaactgccacggccgcgggagctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacgggcgacgactgcggcgagctcgtctgccccaacgactgcttc
gaccgcggccgctgcgtcaacggcacctgctactgcgacgagggcttcgcgggtgaggac
tgcggccagctcgcctgccccaacgcctgccacggccgcggccgctgcgacgagggccag
tgcgtgtgcgacgagggcttcgcgggtgcggactgcagcgagaagcgctgtccctctgac
tgccacgaccgcggccgctgcctggacgggcactgcgagtgcgacgacggcttcacgggc
gcggactgcggcgagctccggtgtccccgcgactgcagcggccatggccgctgcgtcaac
gggcagtgcgtgtgcgacgagggtcgcaccggggaggactgcgggcagctgcggtgcccc
aacgactgtcacggccgcgggcgctgcgtgcaggggctgtgcgagtgcgaactcggcttc
cagggctatgactgtggcgagatgagctgcccccatgactgtcaccagcacggccgctgc
ctgaatggcatgtgtatctgtgacgatgcctacatgggtgaggactgccgggagctgcgc
tgccctcgggactgcagccagcggggccgctgcgtggacgggcggtgtgtgtgcgaggac
ggcttcgccggccccgactgcgcagacctctcctgtcccggcgactgccacggccggggc
cgctgcgtggacggccagtgcgtgtgccacgagggcttcacgggcaaggactgtgggcag
cgcaggtgtcccgacgactgtcacggccagggccgctgcgtggacggccaatgcgtgtgc
cacgagggcttcactgggttggactgcgggcagcgctcctgccccaacgactgcagcaac
tgggggcagtgcgtctccggccgctgcatctgcaatgagggctacgccggagaagactgc
tcccaagtgtcccctcccaaagacctcatcgtgacagaagtgacagaagagaccataaac
ctggcctgggaaaatgagatgcgggtcacagagtacctcatcgtgtacacgcccacccac
gaagacggcctagaaatgcagttccgcgtccctggaaaccagacgtccaccaccatccag
gagttggagcctggcgtggagtaccttatccgcgtgtttgccatcctggagaacaagaag
agcattcctgtcagcgccagggtggccacttacctgcctacacctgaaggtctaaaattc
aagtccatcaaggagacatctgtggaagtggagtgggatcctgtggacatcgcttttgaa
acgtgggaggtcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ctgcggaggccggagaccacgtaccggcaaactggcctggctcccgggcaagagtatgag
atatctctgcacatcgtgaaaaacaatacccggggcccaagcctgaagagggtgacaaca
acccgcttggacgcccccagccagatcgaagtgaaagacgttacggacaccactgctctg
atcacctggtccaagcccctggccgagatcgacagcattgagctcacatacgggatcaaa
gatgtgccaggcgaccgaaccagcatcgacctcacacacgaggagaaccagtactccatc
gggaacctgaagccagacacagagtacgaggtttccctcatctcccacagggccgacatg
tctagcagccccgcgagagagaccttcacaacaggcctggatgcgcccagaaatctccgc
cgcatctcccagacagacaacagcatcaccctggagtggaggaacgtcaaggcggccgcc
gacagttacagaattaagtacgcacccatctccggaggtgaccatgccgaggtagaagtc
cccaggaggcaacaaaccacaaccaaaactacactcacaggtctgaggccaggaaccgaa
tatggtattggagtgtctgccgtgaagggggacaaggagagtgacccagccaccgtcaat
gcggccacagacctggacgcgcccagggaccttcgggtttctgaacctacggagaccagc
ttgaccctgctctggcagacgccactggccaagtatgaccgttaccgcctaaactacagt
cttccctcgggccagccagtggaggtgcagctccccagaggcaccacctcctacgtcctg
aaaggcctggaacctgggcaggaatacaccatcctcctcacagcagagaagggcaggcac
aagagcaagcctgcacgggtacaggcatccacagaccacgcccctgaaatggaaaagctc
accgtgaccgaggctggctgggacggcctcaaactcaactggaccacagctgaccaggcc
tatgagcattttgtcattcaggtgcaggaggccaacagggtggaggcagctcagaacctc
acggtgcccggcagcctgcgggctgcggacatccggggcctcaaggccgccaccccttac
agagtcaccatctacggggtgatccggggctatagaacaccaatgctctctgctgaggcc
tccacaggagaagctccccatttgggagaggtcacggtgtccgaggtgggctgggatgcc
ctaaaactccactggacagctccggaaggagcctacgagcagtttctcattcaggtgcag
gaaactgacacagaggaggcagcccaaaacctcactgtcccgggaggactgaggtccgtg
gacctgcctgggctcaaggcagacactcactatagcgtcaccatccgcggggtgactcgg
gacttcagcacaacccctctctctgttgaagtcttgacagaggaggttccagatctgggg
aacctcaccgtgactgaggttagctgggatgccctcagactggactggaccagcccagat
gggatctatgagcagtttgtcattgagatccaggaggctgaccagacccaagaagctcac
agtctcacggttcctggcagcctgtgctccgtggaaatcccaggcctcagggctggtacc
ccttatacaattaccctgcgcggcgaggtcaggggccgcagcactcagccccttgctgtg
gaggtcatcacagcggagctcccccagctgggacacttagccgtgactgaggctggctgg
gacggcctcaaactcaactggaccacagctgaccaggcctatgagcattttgtcattcag
gtgcaggaggccaacagggtggaggcagctcagaacctcacggtgcccggcagcctgcgg
gctgcggacatccggggcctcaaggccgccaccccttacagagtcaccatctacggggtg
atccggggctacagaacaccaatgctctctgctgaggcctccacagccggagaacctgaa
attggaaacttaaatgtttccgacatcactcctgagagcttcaatctctcctggacagct
accgatggggccttcaagacctttaccattgaaattattgattccaataggttcctggaa
acgatggaatataacatctctggtgctgaacgaactgctcacatctcagggctccgcccc
aataatgattttattgtctacctctctggactcactcccagcatccggaccaaaaccatc
agtgccacggccaccacagaggccctgccccttctggaaaacctaaccatttccgacatt
aatccctacgggttcacagtttcctggatggcattgaagaatgcctttgacagattccta
gtaacggtggtggattctgggaagctgctggacccccaggaattcacactttcaggaacc
cagaggaagctggagcttagaggcctcataaccggcattggctatgaggtcatggtctct
ggcttcacccaagggcaccaaaccaagcccttgagggctgagattgttacagaagccgag
ccagaagttgacaaccttctggtttcagatgccaccccagacggtttccgtctgtcctgg
acagctgatgaaggggtcttcgacagctttgtcctcaaaatcagagataccaaaaagcag
tctgaaccactggaaataaccctacttgcccccgaacgtaccagggacataacaggtctc
agagaggccactgaatacgaaattgaactctatggaataagccgtggaaagctatcccag
ccagtcagtgctatagcaacaacagccatgggctccccgaaggaaatcgttttctcagac
atcactgaaaactcagccactgtcagctggaaggcacccactacccaggtggagagcttc
cgggttacctctgtacccactgcaggaggtacaccctcagtggtaactgtggatgggacc
aagactcagaccaggctgctgagactcttacctggagtggagtacctcgtcagcgtcatc
gccctgaagggctttgaagaaagcacgcctgtctcggggatgctcaccacagctctggat
ggcccatctggcctggtgacagccaacatcaccgactcagaagccttggccatgtggcag
ccggccatcgcccctgtggacaattatgtcatctcctacacaggggagagagagccagaa
actacccgcaaggtgtccgggaacacggtggagtatgcgctgaccaacctcgagcctgcc
acggaatacacgctgaggatctttgcagagaaagggccccaaaagagctcaactatcacc
accaagttcatgacagacctcgattctccaagagacttcactgctactgaggttcagtcg
gaaactgccattctcacctggagacctccccgggcatctgtcactggttacctgttggtg
tatgaatctgtggacggtacaaccaaggaggttgttgtggatccagacaccacctcttat
agcctggcagagctgagcccatccacccactacatggccaagatccaggcactgaatggg
cccctgagaagcaagatcatcaagaccaccttcaccacaactggagtcctgtacccattc
cccagggactgctcccaagccatgctgaatggagacacgacctctggcgtctacaccgtt
tatctgaacaacgacaagacccaaaagcaggaagttttctgtgacatgacctctgacggg
ggtggatggatcgtgttcctgagacgcaaaaatggacgtgaggatttctatcgaaactgg
aaggcctacactgctggatttggggacctaaaagaagaattctggcttgggctggacacc
ctgaacaaaatcacagcccaagggcagtacgagctccgggtggacctgcgggaccacggg
cagtcagcctatgccgtctacgacaagttcagcgtgggagacgcccggactcgctaccgg
ctgaaggtggaggggtacagcgggacagcaggtgactccatggcctaccacaacggcaga
tccttctccacctttgacaaggacacagactcggccatcaccaactgtgccctgtcctac
aagggggctttctggtacaagaactgccaccgcgtcaacctgatggggagatacggggac
aataaccacagtcagggtgttaactggttccactggaagggccacgagtattcaatccag
tttgctgagatgaagctgagacccagcaacttccgaaacctcgaaggcaggcgcaaacgg
gcgtaa
DBGET
integrated database retrieval system
