Phocoena phocoena (harbor porpoise): 136124644
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Entry
136124644 CDS
T11058
Symbol
LINGO2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136124644 (LINGO2)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
136124644 (LINGO2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_9
Ig_C17orf99
LRR_LRWD1
Ig_6
Sp38
C2-set_3
Motif
Other DBs
NCBI-GeneID:
136124644
NCBI-ProteinID:
XP_065735491
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Position
6:39767315..39769135
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AA seq
606 aa
AA seq
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MLHTALSCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLANLTKLDISENKIVILLDYMFQDLRNLKALEVGDNDLVYISRRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLSINNMPVYAFKRLFHLKHLEIDYWPLLDM
MPANSLYGLNLTSLSITNTNLSVVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ
ELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRHPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL
LVDEGQTVQLECNADGDPQPVISWVTPRRRFITAKSNGRATVLGDGTLEIRFAQDQDSGM
YVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTVSNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacggccttatcatgttggcagccattcctgggtctggctgtggtcttaatc
ttcatgggatccaccattggctgccctgctcgctgcgagtgctcagcccagaacaaatct
gttagctgccaccgaaggagattgatcgccatcccagagggcattcccatcgagaccaaa
atcttggacctcagcaagaacaggctgaaaagtgtcaaccctgaagaattcatctcatac
cctctgctggaggagatagacttgagtgacaacatcatcgccaatgtggagccaggagca
tttaacaacctcttcaacctgcgttccctccgcctgaagggcaatcgcctgaagttggtc
cctctgggggtcttcacgggcctcgccaacctcaccaagcttgacattagtgaaaataag
attgtcattttactggactacatgttccaggatttgcgtaacctgaaggctctagaagtg
ggggataatgacttggtttatatatcacgtagggccttcagtgggttgctgagcttggag
cagctcaccctggagaaatgcaacctaacagcggtaccaacagaagccctctcccatctc
cgcagcctcatcagcctgcacctgaagcatctcagtatcaacaacatgcccgtgtatgcc
tttaaaagactgttccacctgaaacatctagagattgactattggcctttactggatatg
atgcctgccaatagcctctatggtctcaacctcacatccctctcaatcacgaacaccaac
ctgtccgttgtacccttccttgcctttaaacacctggtctatctgacccaccttaacctc
tcctacaatcccatcagcactatcgaagcaggcatgttctcggacctgatccgccttcag
gagcttcatatagtgggggcccagctccgcaccattgagcctcactccttccaagggctc
cgcttccttcgtgtgctcaatgtgtctcagaacctactggaaactttggaagagaatgtc
ttctcctcccctagggctttggaggtcctgagcattaataacaacccactggcctgtgac
tgccgccttctctggatcctgcagcgtcaccccaccctgcagttcggtggccagcagccc
atgtgtgctggcccagacaccattcgtgagaggtcattcaaggatttccacagcactgcc
ctttctttttactttacctgcaaaaaacccaaaatccgtgaaaagaagttgcagcatctg
ctagtggatgaggggcagacggtccagctagaatgcaatgcagatggagacccacagcct
gtgatttcctgggtgacacctcgaaggcgtttcatcaccgccaagtccaatggaagagcc
actgtgttgggcgatggcaccttggaaatccgttttgcccaggatcaggatagcgggatg
tatgtttgcatcgctagcaacgccgctgggaatgacaccttcacagcctccttaactgtg
aaaggattcacttcagaccgcttcctttatgcaaacaggacccctatgtacatgaccgac
tccaatgacaccgtttccaatggcaccaatgccaatactttttccctggaccttaaaacc
atactggtgtctacagccatgggctgtttcacattcctgggagtggtcttattttgtttt
ctccttctttttgtgtggagccgagggaaaggcaaacacaaaaacagcattgaccttgag
tatgtaccccgaaaaaacaatggtgctgttgtggaaggggaggtggctggacccaggagg
ttcaacatgaaaatgatttga
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