Phocoena phocoena (harbor porpoise): 136124672
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Entry
136124672 CDS
T11058
Symbol
LGI3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
pphc
Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136124672 (LGI3)
Membrane trafficking [BR:
pphc04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
136124672 (LGI3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRRCT
LRR_1
LRR_14
Motif
Other DBs
NCBI-GeneID:
136124672
NCBI-ProteinID:
XP_065735517
LinkDB
All DBs
Position
6:16393316..16399943
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AA seq
548 aa
AA seq
DB search
MAGLRARLGSGLGLLALSTLGLCLMLQVGAKRPPKTPPCPPSCSCTRDTAFCVDSKAVPR
NLPSEVISLTLVNAAFSEIHDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE
NNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILSDLDLRGNSLNCDCKVKW
LVEWLTHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLSFPAVSAEPFL
YSSDLYLALAQPGASACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDSQLYVVVAQLF
GGSYIYHWDPNTTRFTKLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWH
QNGFYSQQALHAWHRDTDLEFVDGEGKPRLIVSSSSQAPIIYQWSRTQKQFVAQGEVTQV
PDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGRRY
LALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYR
HVVVDLSA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgcgggccaggctgggctcggggctcgggttgctggcgctgtccacgctg
ggcctctgcctaatgctgcaagtcggcgccaagaggccccccaagacgcccccgtgccca
cccagctgctcctgcaccagggacaccgccttctgcgtggactctaaggcagtgcccagg
aacctgccctccgaggtcatctctctgacgctggtgaatgctgccttttcagagatccac
gatggagcattttcccacctgccactgctgcagttcctgttactcaattccaacaagttt
acactgattggagacaatgccttcacaggactgtctcacctgcagtacctcttcattgag
aacaatgacatctgggcactttccaagtttaccttcagaggactcaagtctttgacacac
ctctcactggccaacaataacctgcagacgctgcctagagacatctttcggcccctggac
atcctgagtgacttggacctgcggggcaactcgctcaactgtgactgcaaggtgaagtgg
ctggtggagtggctgacacacaccaacaccacggtggcgcccatctactgcgccagcccg
ccgcgcttccaagagcacaaggtgcaggatctaccgctgcgggagttcgactgcatcacc
acagatttcgtgctgtaccagaccctgtccttcccagcggtgtcggccgagcccttcctt
tactccagtgacctctatttggctttggcccagccaggagccagcgcctgcaccatcctc
aagtgggactatgttgaaaggcagcttcgagactatgatagaatcccagccccctctgca
gtgcactgcaagccaatggtggtggacagccagctgtatgtggtggtggcccagttgttt
ggtggctcttacatttaccactgggaccccaacaccacgcgcttcaccaagctgcaggac
atcgaccctcagcgcgtgcgcaagcccaatgacctcgaggccttccgcatcgatggcgac
tggtactttgccgtggctgacagctccaaggcgggggccaccagcctctaccgctggcac
cagaacggcttctactcccagcaggccctgcatgcctggcaccgtgacactgacctggaa
tttgtagacggagagggcaagccacgcctgatcgtgtccagcagctcccaggcccccatc
atctatcagtggagtcgcacccagaagcagtttgtggcccagggcgaggtgacccaggtg
cctgatgcccaggctgtgaaacacttccgcgcaggtcgcgacagctacctgtgcctcagc
cgctacatcggcgactccaagatcctgcgctgggagggcacccgcttctccgaggtgcag
gcgctgccctccaggggctcgctggccctgcagcccttcctggtgggtggccgccgctac
ctggccctgggcagcgacttctccttcacacagatctaccagtgggatgaggggcggcag
aaatttgtgcggttccaggagctggcggtgcaggcccctcgggccttctgctacatgcct
gctggggacgcccagctgctcctggcccccagcttcaagggacagacacttgtgtaccga
catgtggtggtggatctcagtgcctag
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