Phocoena phocoena (harbor porpoise): 136124679
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Entry
136124679 CDS
T11058
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc05014
Amyotrophic lateral sclerosis
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136124679 (NEFM)
05022 Pathways of neurodegeneration - multiple diseases
136124679 (NEFM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136124679 (NEFM)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
136124679 (NEFM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
136124679
NCBI-ProteinID:
XP_065735525
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Position
6:complement(13759565..13764127)
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AA seq
858 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTDTRSSFSRVGGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LTYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVH
YLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLELVNHEKAQVQLDSDHLEE
DIHRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEE
EVADLLAQIQASHITVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLT
EAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQ
DTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSIT
GPLYTHRQPSITISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAIAEE
LTVSMKEEVKEEEAEEKKEKKEAEEEVVAAKRSPVKATAPELKGEEEEAKEEEEEEEGAK
SDQAEEGGSEKEVSSEKEEGEQEEEGETEAEGEGEEAAEAKEEKKMEAKGEEVAPKEELV
AEAKVEKPEQAKSPVPKSPVEEVKPKAEAAADKGEQKEEEGKVEEAKKEEAKEAPKEEKG
EKKEEKPKDMPEKKKAESPVKEEVVEEVVAKSVKVSLEKDAKEEEKPQQQEKEKEKEKEK
EKAEEVGKKEEGALKDSRKEDIAINGEVEGKDEVEPEAKEKGSGGEEKKGVVTNGLDLSP
ADEKKGGDRGEEKAVVAKMVEKTTSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTK
KVEKVTSHAVVKEVTQSD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtaaccgacacc
cgctcgagcttcagccgcgtcggcggctccccgtccagcggcttccgctcgcagtcatgg
tcccgcggctctcccagcaccgtgtcctcctcctacaagcgcagcgcgctggccccgcgc
ctcacctacagctcggccatgctcagctccgccgagagcagcctcgacttcagccagtcc
tcgtccctgcttaacggcggctctgggccgggcggcgactacaagctgtcccgctccaat
gagaaggagcagctgcaggggctgaacgaccgcttcgcgggctacatcgagaaagtgcac
tacctggagcagcagaacaaggagatcgaggcggagatccaggcgctacggcagaagcag
gcctcgcacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacc
ctggagctggtgaaccacgagaaggctcaggtacagctggactcggaccacctggaagag
gacatccaccggctcaaggagcgcttcgaggaggaggcacggctgcgcgacgacaccgag
gcggccatccgcgcgctgcgcaaagacatcgaagagtcgtcgctggtcaaggtggagctg
gacaagaaggtgcagtcgctgcaggatgaggtggccttcctgcggagcaatcacgaggag
gaggtggccgacctgctggcccagatccaggcgtcacacatcaccgtggagcgcaaagac
tacctgaagacagacatctcgtcggcgctgaaggagatccgctcccagctcgaatgccac
tcggaccagaacatgcaccaggccgaagaatggtttaagtgccgctacgccaagctcacc
gaggcagccgagcagaacaaggaggccatccgttccgccaaggaagagatcgccgagtac
cggcgccaactgcagtccaagagcatcgagctcgagtcggtgcgcggcaccaaggaatcc
ctcgagcggcagctcagcgacatcgaggagcggcacaaccacgaccttagcagctaccag
gacaccatccagcagttggaaaatgagcttcggggcacaaagtgggaaatggctcgtcat
ttgagagaataccaagatctcctcaacgtcaagatggctctagatatcgagatagcagca
tacaggaaactcctggagggtgaagagaccagatttagcacatttgcaggaagcatcact
gggccgctgtatacacaccgacagccctccatcacaatatccagtaagattcagaaaacc
aaggtagaggctcccaagctaaaggtccaacacaaatttgtcgaggagatcatagaggaa
accaaggtggaagatgagaaatcagaaatggaagaagccctgacggccattgcagaggaa
ttgacagtttccatgaaagaagaggtcaaggaagaagaggctgaagaaaagaaagagaaa
aaagaagccgaagaagaagttgtagccgccaaaaggtctccagtgaaagctactgcacct
gaacttaaaggagaggaggaagaggccaaagaggaagaggaggaagaggaaggagctaaa
tcagaccaagctgaggaaggaggatctgagaaggaagtttctagtgaaaaagaggaaggt
gagcaggaagaggaaggagaaacagaggctgaaggtgaaggagaggaagccgccgaagct
aaggaggaaaagaaaatggaggccaagggtgaagaagtggctcccaaggaggagctcgtg
gcagaagccaaggtggagaagccggagcaagccaagtccccggtgccaaagtcaccagtg
gaagaggtgaagcccaaagcagaagctgcagccgacaaaggagaacagaaggaggaggaa
gggaaagtggaggaagcaaagaaggaagaagcaaaggaagctcccaaggaagagaaggga
gagaaaaaggaggagaagccaaaggacatgccagagaagaagaaggctgaatccccagtg
aaggaggaagtcgtggaggaggtggtcgccaaatcagtaaaggtgagcttggagaaggat
gccaaagaggaggaaaagccacagcagcaggagaaggagaaagagaaggagaaggagaag
gagaaagcggaagaggtggggaagaaggaggagggagctttgaaggattccaggaaggaa
gacatagccatcaacggggaggtggaaggaaaagacgaggtagagccggaagctaaggag
aagggcagtgggggagaagagaagaaaggggttgtcaccaatgggctagacttgagccca
gcagatgaaaagaagggtggtgatagaggtgaggagaaagcggtggtggccaaaatggta
gaaaaaaccaccagtgaggggggagatggtgctaccaagtatatcaccaaatctgtaacc
gtcactcaaaaggtcgaagagcacgaagagacctttgaggagaagttagtgtctactaaa
aaggtagagaaggtcacttcacacgccgtagtaaaggaagtcacccagagtgactaa
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