Phocoena phocoena (harbor porpoise): 136124709
Help
Entry
136124709 CDS
T11058
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc02010
ABC transporters
pphc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136124709 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136124709 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphc02000
]
136124709 (ABCA2)
Transporters [BR:
pphc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
136124709 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
136124709
NCBI-ProteinID:
XP_065735563
LinkDB
All DBs
Position
6:complement(114729756..114749374)
Genome browser
AA seq
2440 aa
AA seq
DB search
MGFLHQLQLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTISVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLNRVVEEGNLFDPARPSLGSE
LEALRQHLEALRSGPDTWESHLDRPAVSSFSLDSVVRDPRELWRFLTQNLSLPDGTAQAL
LAAQVDLPEVYRLLFGSSPALDAGSGIPRDPEPWSRRGSNPLFRMEELLLTPALLEQLTC
TPGSRELGRILTVPQGQETALQGYRDAICRGQAAVRAQRFSGLAAELRNQLDVAKIAQQL
GLDAPNGSAPQPQPQPAPPRRLQALLEDLLDAQKVLQDVDVLSALALLLPQGACTGRPPG
PPANGPGGAANGTGAGAGVGSNTTSEEGAPSAAAPASSSDVLQGQCSAFVQLWAGLQPIL
CGNNRTIEPEALRRGNMSSLGFTSKEQRNLGLLVHLMTSNPKVLYAPAGSEADRVILKAN
ETFALVGNVTHYAQVWLNISAEIRSYLEQGRLQQHLRWLQQYVAELRLHPEALSLSPEEL
PPALRQDNFSLPNGSVLLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQA
YQDNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFL
YGFVWIQDMMERAIIDTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWV
YSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQV
LMHSHVVIIWLFLAVYAVATVMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREE
VAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAV
TMLMADAVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWARAPR
LSVMEEDQACAMESRRLEETRGMEEEPTHLPLVVCVDKLTKVYKNDKKLALNRLSLNLYE
NQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLF
DRLTVEEHLWFYSRLKSMAQEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIA
FVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISH
GKLKCCGSPLFLKGAYGDGYRLTLVKRPAEPGDPQEPGQTASPPGRAQLSSCSEPQVSQF
IRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDTTLEE
VFLKVSEEDQSLENSEADVKESRKDVLPGAVDSLSREGHAGNLARCAELAQSQVSLQSAS
SVGSARGDEGAGYTDVCGDYRPLCENLQDPDNVSLQEAEAETLLRVGQGSRKLEGWWLKV
RQFHGLLVKRFHCARRNSKALSSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQYHN
YTQPRGNFIPYANEERREYRLRLSPDAGPQQLVSTFRLPSGVGATCVLKSPANGSLGPTL
NLSSGESRLLATRFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPVSLDEDPPQAWNTSL
PPTSSPENWTSAPSLPRLVREPVRCTCSGQGTGFSCPGSVGGHPPQMRVVTGDILTDITG
HNVSEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARAPAMVRRIAVRRAAQVFYNNKG
YHSMPTYLNSLNNAILRANLPKSKGSPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIA
IFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCV
IILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPVMYPASFWFEVPSSAYVFLIVINLFIG
ITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQ
FDKMKSPFEWDIVTRGLVAMTVEGFVGFLLTIMCQYNFLRQPQRMPVSTKPVEDDVDVAS
ERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTS
TFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQFDALFDELTAREHLQLYTRLR
GIPWKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTG
MDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNR
FGDGYMITVRTKGSQNVKDVVRFFSRNFPEAVLKERHHTKVQYQLKSEHISLAQVFSKME
QVVGVLGLEDYSVSQTTLDNVFVNFAKKQSDNLEPQETEPPSALRSPLGRLLSFFRPRPP
TTELRALVADEPEDLDTEDEGLVSFEEERAQLSFNTDTLC
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgcaccagctgcagctgctgctctggaagaacgtgacgctgaagcgccgg
agcccgtgggtcctggccttcgagattttcatccctctcgtcctcttcttcatcctgctg
gggcttcggcagaagaagccaaccatctctgtgaaggaagtctccttctacacggcagcc
cccctcacctctgccggcatcctgcccgtcatgcagtcgctgtgcccggatggccagcgg
gacgagtttggcttccttcagtacgccaactccacggtcacgcagctgttggagcgtctc
aaccgcgtggtggaggagggcaacctgtttgaccccgcgaggcccagcctgggctcggag
ctcgaggcgctgcgccagcacctggaggccctcagatccggcccggacacctgggagagc
caccttgaccgacctgcagtgtcctccttctctctggactcggtggtcagggacccacgg
gagctctggcgtttcctgactcagaacctgtcgctgcctgatggcacagcccaggctctc
ctggccgcccaggtggacctgcctgaggtgtatcgcctgctttttggctcttcacctgcc
ctggatgcggggtcaggcatccccagggatccggagccctggagccgccggggcagcaat
cctctattccggatggaggagctgctgttgacccctgccctcctggagcagctcacctgc
acgccaggctccagggagttgggccggatcctcacggtgccccagggtcaggagacagcg
ctgcagggctaccgggacgccatctgcaggggtcaggctgcagtgcgtgcccagcgcttt
tctgggctggccgctgagctccggaaccaactggatgtggccaagatcgcccagcagctg
ggcctggatgcccccaacggctccgccccgcagccgcagccgcagccagcccctccccgg
cggctgcaggcgctgctggaagacctgttggacgcccaaaaggttctgcaggatgtggat
gtcctctcggccctggccctgctgctgcctcagggtgcctgcacgggccggcctcctggg
cccccagccaacggccctggcggggcggccaacggcaccggggctggggcaggcgtgggc
tccaacaccacatccgaggagggtgccccgtccgctgcagccccggcctcctcctcggac
gtgctgcagggccagtgctcagcctttgtgcagctctgggcaggcctgcagcccatcctg
tgtggcaacaaccgcaccatcgagcccgaggcgcttcggaggggcaacatgagctccctg
ggcttcacgagcaaggagcagcggaacctgggcctcctcgtgcacctcatgaccagcaac
cccaaggtcctgtacgcgccggcgggctccgaggcggatcgcgtcatcctcaaggccaac
gagaccttcgcccttgtaggcaacgtgactcactacgcccaggtctggctcaacatctca
gctgagatccgcagctacctggagcagggccggctgcagcaacacctgcgctggctgcag
cagtatgtggcagagctgcggctgcacccggaggcactgagcctgtcgccagaggagctg
ccgcctgccctgcgccaggacaacttctccctgcccaatggctcggtcctcctgcagcag
ctggacaccatcgacaacgcggcctgcggctggatccagttcatgtccaaggtgagcgtg
gacatcttcaagggttttcccgacgaggagagcatcgtcaactacaccctcaaccaggct
taccaggacaacgtcaccgtgtttgccagcgtgatcttccagacccgcaaggacggctcc
ctgccaccccacgtgcactacaagatccgccagaactccagcttcactgagaaaaccaat
gagatccgcagggcctactggcggccggggcccaacaccggcggccgcttctacttcctg
tatggcttcgtctggatccaggacatgatggagcgtgccatcatcgacaccttcgtgggc
cacgacgtggtggagccaggcaactacgtgcagatgttcccctacccctgctacacacgg
gacgactttctgttcgtcatcgagcacatgatgccgctctgcatggtgatttcctgggtc
tactctgtggccatgaccatccagcacattgtggccgagaaggagcatcggctgaaggag
gtgatgaagaccatgggcctgaacaatgccgtgcactgggtggcctggttcatcacgggc
tttgtgcagctctccatctcggtgacggcgctgaccgccatcctcaagtacggccaggtg
ctcatgcacagccacgtagtcatcatctggctctttctggccgtctacgccgtggccacc
gtcatgttctgtttcctggtgtccgtgctgtactccaaggccaagctggcctcggcctgc
ggtggcatcatctacttcctgagctacgtgccctacatgtacgtggcgatccgtgaggag
gtggcccacgacaagatcaccgccttcgagaagtgcatcgcgtccctgatgtccacgaca
gcctttggcctgggctccaagtacttcgccctgtacgaggtggcgggcgtgggcatccag
tggcacacgttcagccagtcgcccgtggaaggggacgacttcaacctgctcttggctgtc
accatgttgatggcagacgcagtcgtctacggtgtgctcacgtggtacatcgaggccgtg
cacccaggcatgtacgggctgccccggccctggtacttcccactgcagaagtcctactgg
ctgggcagcgggcggacggaagcgtgggagtggagctggccgtgggctcgcgcgccccgc
ctcagcgtcatggaggaggaccaggcctgtgccatggagagccggcgcctggaggagacg
cggggcatggaagaggagcccacccacctgccgctggtggtctgcgtggacaagctcacc
aaggtctacaagaacgacaagaagctggccttgaacaggctgagcctaaacctctatgag
aaccaggtggtgtccttcctgggccacaacggggctggcaagaccactaccatgtctatc
ctcaccggcctgttcccaccgacatcgggttcggccaccatctacgggcacgacattcgc
acggagatggacgagatccggaagaacctgggcatgtgcccccagcacaacgtgctcttc
gaccggcttacggtggaggagcacctctggttctactcgaggctcaagagcatggcccag
gaggagatccgcaaggagatggacaagatgatcgaggacctggagctctccaacaagcgg
cactcgctggtgcagacactgtccggcggcatgaaacgcaagctctccgtggccatcgcc
tttgtgggcggctcccgtgccatcatcctggatgagcctacggccggcgtggacccctac
gcacgccgcgccatctgggacctcatcctgaagtacaagccaggccgcaccatcctcctg
tccacccaccacatggacgaggccgacctgcttggggatcgcattgccatcatctcccac
gggaagctcaagtgctgtggctccccgctgtttctcaagggtgcttacggggatggctac
cgcctcacgctggtcaagcggcctgccgagcccggggacccccaagagccagggcagaca
gccagccccccaggtcgggcccagctgagcagctgctccgagccccaggtttcccagttc
atccgcaaacatgtggcctcctgcctgctggtctcggacaccagcaccgagctctcttac
atcctgcccagcgaggccgccaagaagggagcctttgagcgcctctttcagcacctggag
cgcagtctggatgccctgcacctgagcagctttgggctgatggacacgacactggaggag
gtgttccttaaggtatcggaggaggaccagtcgctggagaacagcgaggcagacgtgaaa
gagtccaggaaagatgtgctgcctggggccgtggactcattgtcgagggagggtcacgct
ggcaacctggcccggtgcgcagagctggcacagtcacaggtgtcgctgcagtctgcgtcc
tcggtgggctctgcccgtggtgacgagggggccggctacaccgatgtctgtggcgactac
cgccccctctgtgagaacttgcaggaccctgacaacgtcagcttgcaagaggccgaggcg
gagaccctcttgcgggtcggccagggcagccgcaagctggagggctggtggctgaaggtg
cgccagttccacgggctcctggtgaagcgcttccactgtgcccgccgcaactccaaggcg
ctgtcctctcagatcctgctacctgccttcttcgtctgcgtggctatgacggtggcactc
tccgtcccggagatcggcgacctgcccccgctggtcctgtctccctcccagtaccacaac
tatacccagccccgcggcaacttcatcccctatgccaacgaggagcgccgggagtaccga
ttgcggctgtcccccgacgccggaccccagcagctggtgagcactttccggctgccgtca
ggcgtgggcgccacgtgtgtgctcaagtctccggctaacggctcgctggggcccacgctg
aacctgagcagtggtgagtcgcgcctgctggccacgcggttcttcgacagcatgtgcctc
gagtccttcacgcaggggctgccgctgtccaacttcgtgccgcccccaccctcgcctgcc
ccgtctgactcccccgtgtccctggacgaggacccgccgcaggcctggaacacctccctg
ccgcccacctcctcgccagagaactggacgtcggcaccctccctgccacgcctggtgcgg
gagcccgtccgctgcacctgctccgggcagggcaccggcttctcctgtcccggcagtgtg
ggcgggcacccgccccagatgcgggtggtcacaggtgacatcctgaccgacatcaccggc
cacaatgtctctgagtacctgctctttacctccgaccgcttccggctgcaccggtacggg
gccatcaccttcggcaacgtccagaagtccatcccagcctcgtttggcgcccgggccccc
gccatggtgcggaggatcgcggtgcggcgggcagcccaggttttctacaacaacaagggc
taccacagcatgcccacctacctcaacagcctcaacaacgccatcctgcgtgccaacttg
cccaagagcaagggcagccctgcggcctatggcatcaccgtcaccaaccaccccatgaac
aagacgagcgctagcctctccctggattatctgctgcagggcacggatgtggtcatcgcc
atcttcatcatcgtggccatgtccttcgtgccggccagcttcgtggtctttctggtggct
gagaagtccaccaaggccaagcacctgcagtttgtcagcggctgcaaccctgtcatctac
tggttggctaactacgtgtgggacatgctcaactacctggtcccagccacctgctgtgtc
atcatcctatttgtgtttgacttgccggcctacacgtcacccaccaacttccccgccgtg
ctctccctcttcctgctctacgggtggtccatcacccccgtcatgtacccggcctccttc
tggttcgaggtccccagctcggcctacgtgtttcttatcgtcatcaaccttttcatcggc
atcacggccaccgtggccaccttcctactgcagctctttgagcatgacaaggacctgaag
gttgtcaacagttacctgaaaagctgcttcctcatcttccccaactacaacctgggccac
gggctcatggagatggcctacaacgagtacatcaacgagtactacgccaagatcggccag
tttgacaagatgaagtccccgttcgagtgggacattgtcaccaggggcctggtggccatg
acggtcgagggcttcgtgggcttcctgctcaccatcatgtgtcagtacaacttcctgcgg
cagccgcagcgcatgcccgtgtcgacaaagcccgtggaggacgacgtggacgtggccagc
gagcggcagcgagtgctgcggggcgacgctgacaacgacatggtcaaaatcgagaacctg
accaaggtgtacaagtcgcggaagatagggcgcatcctggccgtggaccgcctgtgcctg
ggcgtgcgtcctggcgagtgctttggcctcctgggcgtcaatggcgcgggcaagaccagc
accttcaagatgctgacgggcgacgagagcacgacggggggcgaggcctttgtcaatggg
cacagcgtgctcaaggagctgctccaggtacagcagagcctgggctactgcccacagttc
gacgccctgttcgacgagctcacggcccgggagcacctgcagctgtacacgcggctccgc
ggcatcccctggaaggatgaggcccgggtggtgaagtgggccctggagaagctggagctg
accaagtacgcggacaagcctgccggtacctacagcggaggcaacaagcggaagctgtcg
acagccattgccctcatcgggtaccctgcattcatcttcctggacgagcctaccacaggc
atggaccctaaggctcggcgcttcctctggaacctcattttggacctcatcaagacaggg
cgctcggtggtgctgacttcgcacagcatggaggagtgcgaggcgctgtgcacgcggctg
gccatcatggtgaacgggcgcctgcgctgtctgggcagcatccagcatctgaagaaccgg
ttcggggacggctacatgatcacggtgaggaccaagggcagccagaacgtgaaggacgtg
gtgcggttcttcagcaggaacttcccggaggccgtgctcaaggagcggcaccacacaaag
gtgcagtaccagctcaagtcggagcacatctcgctggcgcaggtgttcagcaagatggag
caggtggtgggcgtgctgggcctcgaggactactcagtcagccagaccaccctggacaac
gtgttcgtgaacttcgccaagaagcagagcgacaacctggagccgcaggagacagagcca
ccctcggcgctgcggtccccgctgggccgcctactcagctttttccggcctcggcccccc
accactgagctgcgggcgctcgtggccgacgagcccgaggacctggacacggaggacgag
ggcctcgtcagcttcgaggaggagagggcccagctctccttcaacacggacacgctctgc
tga
DBGET
integrated database retrieval system
