Phocoena phocoena (harbor porpoise): 136124721
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Entry
136124721 CDS
T11058
Symbol
RMI1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
136124721 (RMI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136124721 (RMI1)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136124721 (RMI1)
FA (Fanconi anemia) pathway
136124721 (RMI1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
136124721
NCBI-ProteinID:
XP_065735584
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Position
6:complement(33216881..33233541)
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AA seq
626 aa
AA seq
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MSIASIALRIETWLLATWHVKVPLMWLEACINWIQEENDNVNLSQAQMNKQVFEQWLLTD
LRDLEHRLLPDGILEVPKGELNGYFALQINSLVDVSQPAYAQIQKLRGKNTTNDLITAET
QVTPKPWEAKPSRMLMLQLTDGIVQIQGMEYQSIPALHSDLPPGTKLLIYGNISFRLGVL
LLKPENVKVLGGEVDALLEEYAQEKVLARLIGEPDPIVPVIPNNSNQSIPRITDVLHPAL
GPSDEELLASLNENDELAANNNTSLERSCFSTGSSSNTVPIRQSDFEPGLIISPISKEKP
RNQSMLFTDEELDDFSLEEALLLEEAVQKEQTETKELQPLTLNRTTDESIETFSHRSNTL
NNFSLICKNGNNNWNEKNLSEQITNEDKYFSCPSARDQNSSIVSVNHNVPLPHNFTNKDN
NSETYNKIKQTSSSDGHSLNNKILNGELVNYVPKSCSHISNKNEHHLQTCSSRSSENSTN
LSITMDLYSPPFIYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKISDGTA
YLDVDFVDEILTSLIGFSVLEMKQLKKDPCKYQKFLEGLQKCQRDLIDLCCLMTISLNPS
LSKGTVLALQDVNVEHLENLKRRVKK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagctagtattgcattaagaattgaaacctggcttttagctacatggcatgtt
aaagtgcctttaatgtggctggaagcttgtattaactggatccaagaagaaaatgataat
gttaatttgagtcaggcacaaatgaataaacaagtgtttgagcaatggctccttactgat
ctgagagatttggagcatcgtcttttacctgatggcattttagaagttccaaaaggagaa
ctgaatggatattttgctctgcagattaattcattggttgatgtaagtcaacctgcgtat
gcccagatacaaaagttgagaggaaagaatacaaccaatgacctaattacagctgaaaca
caagtaaccccaaaaccttgggaagcaaagccttcacgaatgttgatgctacagctcact
gatggaattgtgcaaatacaggggatggaatatcagtctattccagctcttcatagtgat
cttcctccaggtacaaaacttttgatttatggaaacatttctttccgtcttggtgttctc
ttattgaaaccagaaaatgtgaaggtgttgggaggagaagtagatgctcttttagaggaa
tatgcccaagaaaaagttcttgcaagattaattggggaacctgatcctatagttccagtc
ataccaaataattctaaccaaagcatccccagaattacagatgttctgcatcctgcgtta
ggaccttctgatgaagaactcttggcaagtcttaatgaaaacgatgagcttgcagcaaat
aataacacctctttggaaagaagttgtttcagcacaggtagttcttcaaatactgttccc
atccgacagtcagattttgaaccaggacttattatttctccaatatcaaaggagaaacca
cgaaaccagtctatgctttttactgatgaggaattagatgacttttcattggaggaggcc
ttgcttttagaagaagctgtccagaaagaacaaacagagaccaaagaattacagccactg
actttgaacagaactacagatgaaagtatagagacattttcacatagatctaatactctg
aataatttttctttgatttgcaaaaatggaaataataattggaatgaaaaaaatttatct
gagcaaataactaatgaagacaaatattttagttgtccatctgctagagaccaaaacagt
agtattgtttcagttaatcataatgtacccctaccccataattttacaaataaagataac
aactcagagacatataataaaataaaacaaaccagcagttcagatggacattccttaaat
aataaaatattaaacggagagctggtcaattatgtaccaaaaagttgttcacacatttct
aataaaaatgagcaccacttacagacttgttcttcaagatcatcagagaatagcactaat
ctttctatcaccatggatttatattctccaccttttatctatttgtctgttctaatggcc
agcaaaccaaaggaagttacaacagtgaaagtcaaagcatttattgtaaccttaactgga
aatctctcaagttctggtggcatttggagtataacagcaaaaatttctgatggtactgca
tatctagatgtagactttgtagatgaaatacttactagtctgatagggttttcagtacta
gaaatgaaacagttaaaaaaggatccttgtaaataccaaaagttcctggaaggtttgcag
aaatgtcagagagatctaatagatttgtgctgtctaatgactatttcattgaatccctcc
ttgtctaagggaacggtactggcattacaagatgttaatgtggaacaccttgagaaccta
aagaggcgagtaaagaaataa
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