Phocoena phocoena (harbor porpoise): 136124744
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Entry
136124744 CDS
T11058
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136124744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136124744
03041 Spliceosome [BR:
pphc03041
]
136124744
03032 DNA replication proteins [BR:
pphc03032
]
136124744
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
136124744
Spliceosome [BR:
pphc03041
]
Complex A
U1 snRNP components
Sm proteins
136124744
U2 snRNP components
136124744
Complex B
U1 snRNP components
136124744
U4/U6.U5 tri-snRNP components
136124744
Complex C
U2 snRNP components
136124744
DNA replication proteins [BR:
pphc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
136124744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
136124744
NCBI-ProteinID:
XP_065735610
LinkDB
All DBs
Position
6:complement(107451585..107452024)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPISLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccggggccagggccagaaggtgcagaaggtgatggtgcagccaatcagtctc
atcttcagatacttgcaaaatagatctcggattcaggtgtggctttatgagcaagtgaat
atgcggatagagggctgtattattggttttgatgagtatatgaacctcgtattagatgat
gcagaagagattcattctaaaacaaagtcaagaaaacaactgggtcggatcatgctaaaa
ggagataacattactctgctccaaagtgtctccaactag
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