Phocoena phocoena (harbor porpoise): 136124746
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Entry
136124746 CDS
T11058
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc01522
Endocrine resistance
pphc04330
Notch signaling pathway
pphc04658
Th1 and Th2 cell differentiation
pphc04919
Thyroid hormone signaling pathway
pphc05020
Prion disease
pphc05165
Human papillomavirus infection
pphc05200
Pathways in cancer
pphc05206
MicroRNAs in cancer
pphc05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136124746 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
136124746 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
136124746 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136124746 (NOTCH1)
05206 MicroRNAs in cancer
136124746 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
136124746 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
136124746 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
136124746 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
136124746 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
136124746
NCBI-ProteinID:
XP_065735612
LinkDB
All DBs
Position
6:complement(114334104..114379124)
Genome browser
AA seq
2521 aa
AA seq
DB search
MPPLLAPLLCLALLPALAARGLRCSQPSETCLNGGKCEVFPNGTEACVCSGAFAGQRCQA
PNPCLSAPCKNGGTCHTVERDGLVDYTCRCRLGLSGPLCLTPRDHACLASPCLNGGTCDL
LTLTEYKCLCPPGWSGKTCQQADPCASNPCANGGQCLPFEASYICGCPPGFHGPTCRQDV
NECSQNPGLCHHGGTCHNEVGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDT
AHECACLPGFTGQNCEANIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQHCTEDVDEC
QLMPNACQNGGTCHNAHGGYNCVCVNGWTGEDCSENIDDCASASCFHGATCHDRVASFYC
ECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLG
ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM
PGYEGVHCEVNTDECASSPCLQNGRCLDKINEFVCECPTGFTGHLCQYDVDECASTPCRN
GAKCLDGPNTYTCVCTEGYTGPHCEVDIDECDPDPCHYGSCKDGVATFACLCWPGYTGHH
CETNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASNPCDSGTCLDKI
DGYECVCEPGYTGSVCHINIDECADNPCHNGGTCEDGVNGFTCRCPEGYHDPTCLSEVNE
CSSNPCIHGACRDSLNGYKCDCDPGWSGANCDINNNECESNPCVNGGTCRDMTSGYVCAC
REGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYAGATCEVVLAPCAPGPCR
NGGECKESKDYESFSCACPVGWQGQTCEIDINECVKSPCRAGASCQNTNGGYRCHCQAGY
TGRNCETDVDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASNPCRNGAN
CTDCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQ
HDVNECDSRPCLHGGTCHDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGRCWQTNA
LYRCECHSGWTGLYCDVPSVSCEVAAWQQGINVTHLCRNGGLCMNVGNTHHCHCQAGYTG
SYCEDQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEVNECLSQPCRNGGTCI
DLTNTYKCSCPRGTQGVHCEINVDDCNPPIDPVSRGPRCFNNGTCVDQVGGYSCTCPPGF
VGERCEGDVNECLSNPCDARGTRNCVQRVNAFHCECRAGHTGRRCESVINGCKDRPCKNG
GSCAVASNTARGFICKCPAGFEGATCENDARSCGSLRCLNGGTCISGPRSPTCLCLGPFT
GPECQFPVGSPCMGGNPCYNQGSCEPTSESPFYRCLCPAKFNGLLCHILDYSFGGGVGLD
IPPPQIAEACELPGCREEAGNKVCSLQCNNHACGWDGGDCSLNFNDPWQNCTQSLQCWKY
FSNGRCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYCKDHFRDGHCDQGCNSAECEWDGL
DCAEHVPERLAAGTLVLVVLMPPEQLRNHSLHFLRELSRLLHTNVVFKRDAGGQQMIFPY
YGREEELRKHPIRRSVDGGASLLPGSGGGRRRRELDPMDIRGSIVYLEIDNRQCVQSSSQ
CFQSATDVAAFLGALASLGSLNIPYKIEAVQSETVEPPPPAPLHFMYVAVVAFVLLFFVG
CGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALVDDNQS
EWGDEGLEAKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRVSATAPTPPQGEADTDC
MDVNVRGPDGFTPLMIASCSGGGLETGKSEEEEDAPAVISDFIYQGASLHSQTDRTGETA
LHLAARYSRSDAAKRLLEAGADANIQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDAR
MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVEAAVVLLKNG
ANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR
LLDEYSLVRSPPLHGAPTLSPPLCSPSGYLGNLKPAVQGKKARKPSTKGLACGGKEPKDL
RARRKKSQDGRGCLLDSSSALSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMPLNHLPG
MPEAHLGVSHLSVAAKPEMAALSGGGRLAFEAGPPRLSHLPVASGTGTVLGAGGSGSCGG
AVNFTVGGAAGLNGQCEWLSRLQNGLVPNQYNPLRGGVAPGTLSTQGPALQHGTVGPLHG
GLSATALSQMMSYQALPNTRLAAQPHLVQHQQNLQMQPQAPQPHLGVGSATSGHAARSFL
AGELSQADVQPLGPGSLAAHTVLPQDSQVLPTSLPAALAPPMTTAQFLTPPSQHSYSSPV
DNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMPSQIAHVPEAF
K
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctctcctggcgcccctgctctgcctggcgctgctgcccgcgctcgccgcacga
ggcctgcgatgttcccagcccagcgagacctgcttgaatggcgggaagtgtgaagtgttc
cccaacggcaccgaggcctgtgtctgcagtggagcctttgcgggccagcgatgccaggcg
cccaacccctgcctcagcgccccctgcaagaacggcgggacgtgccacacggtggagcgc
gacggcctcgtggactacacctgccgctgccgcctgggcctctcggggccgctgtgcctg
acgccccgcgaccatgcctgcctcgccagcccctgcctcaacggcggcacctgcgacttg
ctgactctcaccgagtacaagtgcctttgccccccgggctggtcagggaagacatgccag
caggcggacccctgcgcctccaacccctgtgccaacgggggccagtgcctgcccttcgag
gcctcgtacatctgcggctgcccacccggcttccacggccccacctgcaggcaggacgtc
aacgagtgcagccagaaccccgggctctgccaccacggtggcacctgccacaatgaggtc
ggctcctaccgctgcgcctgccgcgccacccataccggcccccactgcgagctgccctac
gtgccctgcagcccctccccctgccagaacgggggcacctgccgccccacgggggacacc
gcccacgaatgcgcctgcctgccaggcttcaccggccagaactgcgaggcaaacattgac
gactgtccaggaaacaactgcaagaacggaggcgcctgcgtggacggcgtgaacacttac
aactgccgctgccccccggagtggacaggtcagcactgcaccgaggatgtggacgagtgc
cagctcatgcctaacgcctgccagaacggcgggacctgccacaatgcccacggcggctac
aactgcgtgtgcgtcaacggctggacaggcgaggactgcagcgagaacattgatgactgc
gccagtgcctcctgcttccacggtgccacctgccacgaccgcgtggcctccttctactgc
gagtgtccccacggccgcacgggtctgctgtgccacctcaatgacgcctgcatcagcaac
ccctgcaatgagggctccaactgcgacaccaaccccgtcaacggcaaggccatctgcacc
tgcccctcgggctacacggggccggcctgcagccaggacgtggacgagtgctcgctgggc
gccaacccctgtgagcacgcgggcaagtgcatcaacacgctgggctccttcgagtgccag
tgtctgcagggctacaccggcccgcgctgcgagatcgacgtcaacgagtgtgtgtcgaac
ccgtgtcagaacgacgccacctgcctggaccagatcggggagttccagtgcatctgcatg
cccggctacgagggcgtgcattgcgaggtgaacacggacgagtgtgccagcagcccctgc
ctccagaacggccgctgcctagacaagatcaacgagttcgtgtgcgagtgccccacaggc
ttcaccgggcacttgtgccagtacgacgtggacgagtgtgcaagcacgccctgcaggaat
ggcgccaagtgcctggacgggcccaacacctacacctgtgtgtgcacagaaggctacaca
gggccccactgtgaggtggacattgacgagtgcgaccccgacccctgtcactacgggtcc
tgcaaggacggcgttgccaccttcgcctgcctgtgctggccgggctacacgggccaccac
tgcgagaccaacatcaacgaatgccacagccagccctgccgccacgggggcacctgccag
gaccgcgacaatgcctacctctgcttctgtctcaaggggaccacaggccccaactgtgag
atcaacctggacgactgtgccagcaacccttgtgactcgggcacatgtctggacaagatt
gacggctacgagtgtgtatgtgagccgggctacacagggagcgtgtgccacatcaacatc
gatgagtgcgcggacaacccctgtcacaacggcggcacctgcgaggacggcgtcaacggc
ttcacctgccgctgccccgagggctaccacgaccccacctgcctgtccgaggtcaacgag
tgcagcagcaacccctgcatccatggggcctgccgggacagcctcaacgggtacaagtgt
gactgtgaccccgggtggagtggggcgaactgtgacatcaacaacaacgagtgtgagtcg
aacccctgtgtcaacggcggcacctgcagggacatgaccagcggctacgtgtgtgcgtgc
cgggaaggcttcagtggccccaactgccagaccaacatcaacgagtgtgcgtccaacccg
tgtctgaaccagggcacgtgtatcgacgacgtggctgggtacaagtgcaactgcctcctg
ccctacgcaggagccacgtgcgaggtggtgctggcgccatgtgcccccggcccctgcaga
aacggcggcgagtgcaaggagtccaaggactacgagagcttctcctgcgcctgccccgtg
ggctggcaggggcagacctgcgagattgacatcaacgagtgcgtgaagagcccgtgccgc
gcaggagcctcctgccagaacaccaacggcggctaccgctgccactgccaggccggctac
acgggccgcaactgcgagacggacgtcgatgactgccggcccaacccgtgccacaacggg
ggctcctgcacagacggcatcaacacagccttctgcgactgcctgcccggcttccagggc
gccttctgcgaggaggacatcaacgagtgcgccagcaacccctgccgcaatggcgccaac
tgcaccgactgcgtggacagctacacctgcacctgccctgcgggcttcagcgggatccac
tgtgagaacaacactcctgactgcacggagagctcctgcttcaacggcggtacctgcgtg
gacggcatcaactcctttacctgcctgtgtccgccaggcttcacgggcagctactgtcag
cacgacgtcaatgagtgcgactcgcggccctgcctgcacggcggcacctgccacgacagc
tacggcacctacaagtgcacctgcccgcagggctacactggcctcaactgccagaacctc
gtgcgctggtgtgactcctcgccctgcaagaatggcggcaggtgctggcagaccaacgcc
ttgtaccgctgcgagtgccacagtggctggactggcctctactgcgacgtgcccagcgtc
tcctgtgaggtggccgcatggcagcaaggcatcaatgttacccacctgtgccggaacgga
gggctctgcatgaatgtgggcaacacgcaccactgccactgccaagcgggctacacgggc
agctactgcgaggaccaggtagacgagtgctcgcccagcccttgccagaacggggccact
tgcaccgactaccctggtggctactcctgcgagtgcgtggctggctaccacggggtgaac
tgctccgaggaggtcaacgagtgtctgtcccagccgtgccggaatgggggcacctgcatc
gacctcaccaacacctacaaatgctcctgcccccggggcacgcagggcgtgcactgcgag
atcaacgtggacgactgcaacccccccatcgatcccgtgtcccggggccccaggtgcttt
aacaacggcacctgcgtggaccaggtgggcggctacagctgcacctgcccgcccggcttc
gtgggcgagcgctgtgagggtgatgtcaacgagtgcctgtccaacccctgcgacgcccgc
ggcacccggaactgcgtgcagcgcgtcaacgccttccactgcgagtgccgcgccggccac
accgggcgccgctgtgagtcggtcatcaacggctgcaaggacaggccctgcaagaacggg
ggcagctgtgccgtggcctccaacaccgcccgcggcttcatctgcaaatgcccagcgggc
ttcgagggtgccacgtgtgagaacgacgcacgcagctgcggcagcctgcggtgcctcaac
ggcggcacctgcatctcgggcccgcgcagccccacctgcctgtgcctaggccccttcacc
ggccccgagtgccagttccctgtcggcagcccctgcatgggtggcaacccctgctacaac
cagggcagctgcgagcccacgtccgagagccccttctaccgctgcctgtgccccgccaag
ttcaacgggctcctgtgccacatcctggactacagcttcggcggcggcgtgggcctcgac
atccccccgccgcagatcgcggaggcctgcgagctccccggctgccgcgaggaggccggc
aacaaggtctgcagccttcagtgcaacaaccacgcctgcggctgggacggcggtgactgc
tccctcaacttcaacgacccctggcagaactgcactcagtccctgcagtgctggaagtac
ttcagcaatggccgctgtgacagccagtgcaactcggccggctgcctcttcgacggcttc
gactgccagcgcgcagaaggccagtgcaaccccctgtacgaccagtactgcaaggaccac
ttcagggacgggcactgcgaccagggctgcaacagtgccgagtgcgagtgggacgggctg
gactgcgcggagcacgtgcccgagcggctggcggccggcacgctggtgctcgtggtgctg
atgccgcccgagcagctccgcaaccactcgctgcacttcctgcgcgagctcagccgcctg
ctgcacacgaacgtggtcttcaagcgtgacgccggcggccagcagatgatctttccctac
tacggccgcgaggaggagctgcgcaagcaccccatcagacgctctgtggacggcggggcc
tcgctgctcccgggcagcgggggcgggcgccggcgcagggagctggaccccatggacatc
cgcgggtccatcgtctacctggagatcgacaaccggcagtgcgtccagtcgtcctcacag
tgcttccagagcgccacggacgtggccgccttcctgggcgcgctcgcctcgctgggcagc
ctcaacatcccctacaagatcgaggccgtgcagagtgagacggtggagccgcccccgccc
gcgccgctgcacttcatgtacgtggccgtggtggcctttgtgctgctcttctttgtgggc
tgcggggtgctgctgtcgcggaagcgccggcggcagcatggccagctctggttccccgag
ggcttcaaggtgtcggaggccagcaagaagaagcggcgggagcccctcggcgaggactcc
gtgggcctcaagcccctgaagaacgcctcggacggcgccctcgtggacgacaaccagagc
gagtggggcgacgagggcctggaagccaagaagttccggttcgaggagcccgtggtcctt
cccgacctggatgaccagacagaccaccgccagtggacccagcagcacctggacgccgct
gacctccgcgtgtccgccacggcccccacgccgccccagggcgaggccgacaccgactgc
atggatgtcaacgtccgcgggccggacggcttcacgcccctcatgatagcctcctgcagc
ggagggggcctggagaccggcaagagcgaggaggaggaggacgcacccgccgtcatctcg
gacttcatctaccagggcgccagcctgcacagccagacggaccgcaccggcgagaccgcc
ctgcacctggctgcccgctactcgcgctccgacgcggccaagcgcctgctggaggccggc
gctgacgccaacatccaagacaacatgggacgcaccccgctgcacgcggccgtggctgcc
gacgcgcagggtgtctttcagatcctcatccggaaccgagccacggacctggacgcccgc
atgcacgacggcacaactccactgatcctggccgcccgcctggccgtcgagggcatgctg
gaggacctcatcaactcccacgccgacgtcaacgccgtggacgacctgggcaagtccgcc
ctgcactgggccgccgcggtgaacaacgtggaggccgccgtcgtgctcctgaagaatggg
gccaacaaggacatgcagaacaacaaggaggagacacctttgttcctggccgcccgggag
ggcagctacgagacggccaaggtgctgctggaccatttcgccaaccgggacatcacggac
cacatggaccgcctgccccgtgacatcgcgcaggaacgcatgcaccacgacatcgtgcgg
ctactggacgagtacagcctggtgcgcagccccccgctgcacggcgcgcccaccctgtcg
ccccctctctgctctcccagcggctacctgggcaacctcaagcccgccgtgcagggcaag
aaggcccgcaagcccagcaccaagggcctggcctgcggcggcaaggagcccaaggacctc
agggcgcggaggaagaagtcccaggacggcaggggctgcttgctggacagctcgagcgcg
ctgtcgcccgtggattccctggagtccccccacggctacctgtcggatgtggcctccccg
cccctcctgccctcccctttccagcagtctccctctatgcccctcaaccacctgcccggg
atgcccgaggcccacctgggcgtcagccacctgagcgtggcggccaagcccgagatggcg
gcgctgagtgggggtggccggctggccttcgaggcggggccgccacgcctctcccacctt
cccgtggcttccggcaccggcacggtcctgggtgccggtggcagcgggagctgcggtggg
gccgtgaatttcaccgtgggcggggccgcgggcttgaacggccagtgcgagtggctgtcc
cggctgcagaatggcctggtgccgaaccagtacaacccgctgcgagggggcgtggcgccg
ggcaccctgagcacgcagggccccgccctccagcacggcacggtgggcccgctgcacggc
ggcctgtctgccaccgccctgtcccagatgatgagctaccaggccctgcccaacacgcgg
ctggccgcccagcctcacctggtgcagcaccagcagaacttacagatgcagccgcaggca
ccgcaaccgcacctcggcgtgggctcggccaccagcggccacgcggcccggagcttcctg
gcgggggagctgagccaggcggacgtgcagcccctgggccccggcagcctggcggcgcac
accgtcctgccgcaggacagccaggtcctgcccacgtcgctgccggccgcgctggccccg
cccatgaccaccgcccagttcctgacgcccccctcccagcacagctactcctcccccgtg
gacaacacccccagccaccagctgcaggtgcccgagcaccccttcctcaccccgtccccg
gagtcccccgaccagtggtccagctcatcgccacactccaacatctccgactggtccgag
ggcatctccagcccgcccaccagcatgccgtcccagatcgcccacgttcctgaggccttt
aagtga
DBGET
integrated database retrieval system
