Phocoena phocoena (harbor porpoise): 136125064
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Entry
136125064 CDS
T11058
Name
(RefSeq) protein argonaute-4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136125064
03036 Chromosome and associated proteins [BR:
pphc03036
]
136125064
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136125064
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136125064
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136125064
microRNA pathway
RISC loading complex
136125064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
136125064
NCBI-ProteinID:
XP_065735973
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Position
1:28669158..28710927
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AA seq
861 aa
AA seq
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MEALGPGPPTSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRV
NRDVVDTMVRHFKMQVFGDRQPGYDGKRNMYTAHPLPIGRERVDMEVTLPGEGKDQTFKV
SVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYH
PLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPL
TDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQ
YFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATAR
SAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVLPAPMLQYGGRNKTVA
TPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQ
PCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQ
VKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKK
PSIAAVVGSMDGHPSRYCATVRVQTSRQEISQELLYSQEVIQDLTNMVRELLIQFYKSTR
FKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCA
DKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADE
LQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRD
PQALAKAVQIHHDTQHTMYFA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgggacccggacctccaaccagcctgtttcagccgcctcgtcgtcctggc
cttggaactgttggaaaaccaattcgactgttagccaatcattttcaggttcagattcct
aaaatagatgtgtatcactatgacgtggatattaaaccagaaaaacggcctcgtagagtc
aacagggacgtagtagatacaatggtgcggcacttcaagatgcaggtatttggtgatcgg
cagcctggctatgatggcaaaagaaacatgtacacagcacatccactgccaattggacgg
gagagggttgatatggaagtgacccttccaggtgagggtaaagaccagacctttaaagtg
tctgttcagtgggtatcagttgtgagccttcagttgcttttagaagctttggccgggcac
ttgaatgaagtcccagatgactcagttcaagcacttgatgttatcacaagacaccttccc
tccatgaggtacactccagtgggtcgctcctttttctcacctcctgaaggttactatcac
cctctgggagggggcagggaggtttggtttggctttcatcagtctgtgagacctgccatg
tggaatatgatgctgaatattgatgtatctgcaactgctttctaccgggctcagcctatc
attgagttcatgtgtgaggttttagacattcagaacatcaatgaacagaccaaaccccta
acagactcccagcgtgtcaagtttaccaaagaaatcagaggtcttaaagttgaggtgacc
cactgtggacagatgaaacgaaaatatcgagtgtgtaatgtgactagacggccagccagt
catcagacttttcccttacagctagaaaatgggcaagcaatggaatgtacagtagctcaa
tattttaagcaaaagtatagtctgcaactgaaatacccccatcttccctgtctccaggtg
ggacaagaacaaaagcatacatacttgccgcttgaggtttgtaatatagtggcaggacaa
cgatgtataaagaagctcacagacaatcagacttccacgatgatcaaagccacagcaaga
tctgctcctgacagacaagaagaaatcagtagactggtgaagagtaacagcatggtgggc
ggacctgatccatatcttaaagaatttggtattgttgtccacaatgaaatgactgagctc
acaggcagggtacttccagcaccaatgctgcaatacggaggccggaataaaacggtagcc
acacccaaccagggtgtctgggacatgcgaggaaagcagttttatgctggcattgaaatt
aaagtttgggcagttgcttgttttgcgcctcagaaacaatgtagggaagatttactaaag
agtttcactgaccagctccgtaaaatctctaaggatgcaggaatgcccatccagggtcag
ccatgtttttgcaagtatgcacaaggtgcagacagcgtggagcccatgtttaaacacctg
aaaatgacatatgtgggcctacagctgatagtggttatcttgcctgggaagacgccagta
tatgcggaggtgaaacgtgttggagataccctcctgggtatggctacacagtgtgtccag
gtaaaaaatgtagtgaagacctcacctcaaaccctttccaacctttgcctgaagataaat
gcaaagctcggaggaattaacaatgtgcttgtacctcatcaaaggccctcggtgttccag
cagcctgtcatcttcctgggagcggatgtcacgcaccccccagcaggggatgggaagaag
ccttccattgctgctgtcgttggcagtatggacggccaccccagccggtactgtgccact
gttcgggtgcagacgtcccgccaggagatctcccaggagctcctctatagtcaggaggta
atccaggaccttactaacatggttcgagagctgctgatccagttctacaaatccacacgc
ttcaaacccactcggatcatctattaccgtggaggggtatccgagggacagatgaaacag
gtagcttggccagaactaatagcaattcgaaaggcatgtattagtttggaagaagattac
cggccaggaataacctatattgtggtgcagaaaagacatcacacacgactcttctgtgca
gataaaacagagagggtggggaaaagtggcaatgtaccagcaggcactaccgtggatagc
accatcacacatccatctgagtttgacttttacctctgtagtcatgcaggaattcaggga
accagccgtccttcacattaccaggtcttgtgggatgacaactgcttcaccgcagatgag
ctccagttactaacttaccagctatgtcatacctatgtgcggtgtacacgctcagtctct
attccagcccctgcctattatgcccgccttgtagcattcagagcaaggtatcatctggtg
gataaagatcatgacagtgcggaaggcagtcatgtgtcaggacagagcaatggccgagat
cctcaggccttggctaaagctgtgcagatccaccatgatacccagcacacgatgtatttt
gcctga
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