Phocoena phocoena (harbor porpoise): 136125443 Help Entry 136125443         CDS       T11058                                  Symbol COL4A4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04151   PI3K-Akt signaling pathway pphc04382   Cornified envelope formation pphc04510   Focal adhesion pphc04512   ECM-receptor interaction pphc04518   Integrin signaling pphc04820   Cytoskeleton in muscle cells pphc04926   Relaxin signaling pathway pphc04933   AGE-RAGE signaling pathway in diabetic complications pphc04974   Protein digestion and absorption pphc05146   Amoebiasis pphc05165   Human papillomavirus infection pphc05200   Pathways in cancer pphc05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:pphc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     136125443 (COL4A4)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136125443 (COL4A4)    04518 Integrin signaling     136125443 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     136125443 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     136125443 (COL4A4)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     136125443 (COL4A4)   09154 Digestive system    04974 Protein digestion and absorption     136125443 (COL4A4)   09158 Development and regeneration    04382 Cornified envelope formation     136125443 (COL4A4)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     136125443 (COL4A4)   09162 Cancer: specific types    05222 Small cell lung cancer     136125443 (COL4A4)   09172 Infectious disease: viral    05165 Human papillomavirus infection     136125443 (COL4A4)   09174 Infectious disease: parasitic    05146 Amoebiasis     136125443 (COL4A4)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     136125443 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pphc04147]     136125443 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:pphc00536]     136125443 (COL4A4) Exosome [BR:pphc04147]  Exosomal proteins   Exosomal proteins of other cancer cells    136125443 (COL4A4) Glycosaminoglycan binding proteins [BR:pphc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136125443 (COL4A4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  136125443 NCBI-ProteinID:  XP_065736255 LinkDB All DBs Position 7:complement(103704610..103835642) Genome browser AA seq 1700 aa AA seqDB search MVAVKTFVQTFIMYHRNSVMYFTLLHYKAFEGRLLVLLLFSVQHAYGGGKKFIGPCGGRD CSLCQCFPEKGSRGQPGPPGPQGPIGPLGPPGPIGIPGEKGMRGDSGLPGAAGDKGDKGP TGVPGFPGLDGIPGHPGPPGSRGKSGVDGYNGSRGAPGFPGERGAPGPQGSPGLLGKKGE KGNSVFILGVIKGIQGDRGDPGPPGLPGSRGVRGPAGPVGYPGEPGLAGPPGPPGSPGLK GNPGVGVKGQMGDPGEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGTPGIIGPPGPPGPKG EPGIGTKGEKGIPGFPGPRGDPGFYGSPGFPGLKGEPGVFGDPGPFGFLGPKGDPGDRGH PGPPGFVATPALPLKGPPGDPGHPGRYGETGAVGPPGPPGPPGRPGEVCAGMMGPPGPRG FPGHPGFPGAAGIPGRADSAPGKPGNQGPPGLPGVPGLPGPPGSDVVYCSAGPPGPQGIK GKVGPPGRRGSKGEKGNTGLCACQPGPSGPPGPPGLPGRQGSKGDLGLPGRLGEKGYPGL PGARGSPGPPGKPGTSGPPGSKGEKGDLVVSRVKGHKGERGPDGPPGFPGQQGQHGQDGY PGEKGDPGPLGDHEDAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGERGQPGAPGCPG KRGPDGWKGQKGDTIPCNVTYPGRPGPPGFDGPPGPKGFPGRRGAPGLRCLDGEKGQRGK PGISEIPGPPGFHGDMGDPGFGGEKGSSPVGPPGSPGSPGVNGQKGPPGDSAVGYPGPPG KRGLLGVPGSKGLRGDPGRPGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERG APGRPGPPGLPGAPGSPGAPGWKGQQGDTGPPGPAGMKGLPGVPGRPGADGPPGPPGVPG PSGDDALPGLPGPKGPQGLPGFLGFPGERGKPGPDGHPGRKGEHGEQGWPGSLGEQGVKG DKGARGPPGHEGEMDIISKKGETGEPGPPGDGGFPGEEGDKGHPGIQGKKGEPGSCGPPG FHRGEPGRQGQPGLPGPPGPPGSPGLRGLIGFPGFPGDQGEPGSPGPPGLSGIDGTRGPK GYKGEPASQFGLPGPKGERGSPGYPGHLGAPGEQGLPGVQGPGGPPGRPGPPGSSGPAGC PGNPGLPGLQGHPGEMGDPGPRGLVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGT SGSHKMGPPGPVGMPGPKGETGDPGSPGISPPGLFGDKGPPGPPGRPGPPGPAGAPGRAL KGDIPDPGLPGDQGPPGPSGPRGIPGPPGPPGRVELLKGEPGDCGLPGPPGPPGPPGPPG RKGFPGCDGKDGQKGPMGFPGLQGPPGTPGPPGEKGLPGPPGRQGPLGPPGSRGEPGPPA DVDACPRIPGLPGVPGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPG HKGDMGEAGCPGVPGPPGPVGDPGPEGFGPVYPSGFLLVLHSQTDGEPTCPAGMPRLWTG YSLLYLEGQERAHNQDLGLAGSCLPMFSTLPFAHCNIHQVCQYARRNDRSYWLASAAPLP MTPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSVPPCPRTWRSLWIGYSFLMHTGAGDQ GGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSAPSPDTL KESQAQRQKISRCQVCVKNS NT seq 5103 nt NT seq  +upstreamnt  +downstreamnt atggtcgctgtgaagacctttgtccagacctttattatgtatcacagaaacagtgtcatg tattttactcttctgcactacaaggcctttgagggcaggttgcttgtacttcttctcttt tctgtgcaacatgcgtacgggggtggaaagaagtttattggtccctgcgggggaagagat tgctctctttgccagtgctttcctgaaaaggggtctcggggccaaccaggaccaccaggg ccacagggtcctattggacccctggggccaccaggacccattggaattccaggagagaaa gggatgagaggtgacagtggccttcctggagcagcaggtgacaagggtgataagggtcca accggtgttcctggattcccaggtttggatgggatacctgggcacccagggcctcctgga tccagaggcaaatctggtgtagatggctacaacggctcaagaggtgctccaggctttcca ggagaaagaggagctcctggcccacaaggctccccaggccttcttgggaaaaaaggagaa aaaggaaattcagtgttcattttaggtgtcattaaaggtattcagggtgacagaggggac ccaggacctcccggcttaccaggctcaaggggagtgagaggaccagcaggcccagtggga tatccaggagagccggggttggcaggacctccaggccctcctgggagtccaggtttgaag ggtaatcctggcgtgggagtaaaggggcaaatgggagacccgggtgaggttggccaacag ggatctccaggacccacccttctggtgcagccgcctgactctggtctctataaaggagaa aagggtattaaaggaacgcctggaatcattggacctcccggaccaccaggccccaagggg gaacccggtattgggacaaaaggagagaaaggtattcctggatttccaggacctcggggg gaccctggcttctatggatctccaggttttccaggattaaagggggaaccaggagtgttt ggagatcctgggccgtttggatttcttggtccaaagggagatcctggagaccgcgggcac ccaggaccaccagggtttgtggcaactccagctcttccactcaaaggccctccaggggat ccagggcaccctggccgctatggagaaacgggggctgttggaccacctggtccccctggt ccccctggtagaccaggggaagtctgtgcaggcatgatgggaccccctgggccacgaggg tttcctggtcatccaggatttccaggggcagctggtattcctgggagagctgattctgct ccagggaaaccaggcaaccagggaccacctgggttgcctggagtgccagggttgccggga cctccaggatcagatgttgtatattgtagtgctgggcctcctggaccacaaggaataaaa ggcaaagtgggtcctccaggaagaagaggctcaaaaggagaaaaaggcaacacagggctc tgtgcctgccagcctggtccctcaggcccacccggccctccaggacttcctgggaggcaa gggagtaaaggagacttgggactccctgggcgacttggagaaaaaggttacccaggcctt cctggtgccagaggatctccagggccaccaggaaaacctggtacctcaggaccacctggc agcaaaggagagaaaggtgacctggttgtatcaagagtgaaagggcacaaaggagaaaga ggtcctgatgggcccccaggatttccagggcagcagggacaacacggtcaagatggatat cctggagaaaaaggggacccaggaccgctgggagatcatgaagatgcagccccaggtgat aaagggcctcctggaccaccaggccccccgggcagagcaggacctagggggcctccggga ctgggatttcctggtccaccaggagagagagggcaaccaggagctccaggctgcccaggc aagaggggccctgatggctggaagggtcagaaaggtgatacaattccttgtaacgtaacc taccctgggaggccaggcccgccaggttttgatggacctccaggtccaaagggatttcca ggtcgtcggggagctcctgggttgaggtgtctggatggggaaaagggtcaacgtggcaaa ccaggaatctcagaaatacctggtccacctggttttcatggtgatatgggagatccaggt tttggaggtgaaaaggggtcctcccctgtcgggcccccaggctctccaggttcacctgga gtgaatggtcagaaaggacctccaggagactctgctgttggctacccaggacccccagga aagaggggtcttttaggagtaccagggtcaaaaggactcagaggtgatcccggacgaccg ggggctgcagggccagctggcatgcccggattcccgggtctcaaaggtcccaaagggaga gagggaagtgctgggtttccagggatcccaggtccacccggccattcctgtgaaagaggc gctccagggagacctgggccaccagggctccctggagctccaggaagtccaggtgcccca ggttggaaaggacaacaaggggacacggggcctcctggacccgctggaatgaagggcctc cccggagtcccaggacggccaggggcagatggacccccagggcccccgggagtcccaggc cccagtggggatgatgcgctacctggtcttccaggcccaaagggaccccaggggctaccc ggcttcctgggttttccgggagagagaggaaaacctggcccggacggacaccctggcaga aagggagaacacggagaacagggttggcccggctccctgggagagcaaggagtgaaaggt gacaaaggagcaagaggacccccaggacatgaaggagaaatggatattatttcgaaaaag ggggaaaccggggaacctggacctcctggagatggtggattcccaggagaagaaggtgat aaaggccatcctgggatacaagggaagaaaggagagccaggaagctgtggaccacctgga tttcacagaggggagcctgggaggcaagggcagccaggccttcctggacccccaggccct ccaggctcacctgggctgagagggctcattggctttccgggatttccaggtgaccagggt gagccaggttctccagggccccctggactttcaggaattgatggtacaagaggacctaaa ggatacaaaggggaacctgcaagtcagtttggcctacctggtccaaagggtgagcgaggt agccctggatatccaggacatttgggagcacctggagagcagggcttgcccggtgttcaa ggacctggaggaccacccggaaggccaggaccgcctggctcctctggaccagcggggtgt ccaggtaatccagggctgcctgggctgcagggacatccaggagaaatgggggatcctggg ccaagaggcctcgtgggggatccaggggcaccaggtcttccgggaataaaaggtccctct gggtcgcccggcctgaacggcttgcacggtttaaagggtcagaaaggcagcaaaggcact tcaggttcccataaaatgggcccacctggtccagtgggaatgcccgggccaaaaggcgag acaggagaccccgggagcccaggaatttctcctccaggacttttcggagacaaaggtccc ccaggtcccccagggagacctggaccgcctggtcctgcaggtgccccaggaagagctctt aagggtgacattccggacccgggtctgcctggagatcagggacctcctggtcccagtggt ccaagaggaatacccgggcctccagggccccctgggagggttgaacttctgaaaggtgaa ccaggtgactgtggtctgccggggcctccaggtcccccaggcccaccaggccctccagga cgcaaaggcttcccaggatgtgatggaaaagatggccagaaaggaccaatgggattcccg gggctgcaggggccacctggaactcctgggccacctggagagaagggtttacctggacct ccaggcagacaggggcccttgggtcctccaggttccagaggtgaacctgggccccctgca gacgtggatgcttgcccccgaatcccggggcttcctggggtaccaggcccaagaggacca gaaggaaccatggggctccctggaatgagaggccccccaggaccagggtgcaaaggagag cccgggctggatggcaggagaggcgaggatggccttccagggtcccctgggcctccggga cacaaaggtgacatgggagaagcgggctgcccaggagtaccaggccctcctgggcccgtg ggggatcctgggcccgaagggttcggccctgtataccccagtggcttcctcctggttctc cacagtcaaacagatggagaacccacctgccccgcgggcatgcccaggctctggaccggg tatagtctgttatacctggaaggacaggagagagctcacaatcaagaccttggtctggcg ggctcctgcctccccatgttcagcacgctgcccttcgcccactgcaacatccaccaagtg tgccagtacgcccggaggaacgacaggtcctattggctggcgagcgccgcaccgttgcct atgacgccgctctcggaggaggagatccgcccgtacatcagccgctgcgccgtgtgcgag gcccccgcgcaagccgtggctgtgcacagtcaggaccagtctgtcccgccgtgtccgcgg acctggaggagcctctggattgggtactctttcctgatgcacacaggcgctggggaccaa ggaggcggccaggccctcatgtcacccggcagctgcctggaggatttcagagctgcaccg ttccttgaatgccaaggacgtcagggaacttgccacttttttgcgaatgagtatagcttc tggctgacaactgtgagacctgacttgcagttttcctcagcaccctcaccggacaccttg aaagaaagccaagcccagcgccagaaaattagcaggtgccaggtgtgtgtgaagaatagc tag

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