Phocoena phocoena (harbor porpoise): 136125525
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Entry
136125525 CDS
T11058
Symbol
OBSL1
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136125525 (OBSL1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
136125525 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Izumo-Ig
BiPBP_C
C2-set_2
Motif
Other DBs
NCBI-GeneID:
136125525
NCBI-ProteinID:
XP_065736374
LinkDB
All DBs
Position
7:complement(97020245..97039608)
Genome browser
AA seq
1901 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPIVVWEKGGQQLAASERLSF
PADGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEREPQPAERPRPP
PGAGEGAPVFLTGPRSQWVLRGAEVVLECQVGGLPAPTLYWEKDGMALDEVWDSSHFSLE
PGRAEGRPGASLALRILAARLPDSGVYVCHARNAHGHARAGALLQVQQPPESPPEDPDEA
PNPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHWEGHPLLPDRRRLMYRDRDG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIVVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLIIHRLKADDDGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVFEGENAVLLVETCEAGVEGRWSRDGEDLPATCQSSSGHMH
ALVLPGVTREDAGEVTFSLGNSRTTTLLRVKCVKHNPPGPPVLAEMFKGHKNTVLLTWKP
PEPVPETPFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRVCTVSEHGR
SSHVVFHGSAHLVPTARLVAGLDDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKSNEPE
GQVEPGALRYRMEQKGLQHRLILQAVRHQDSGALVGFSCPGVQDSAALTIQESPVHILSP
QDKVSLTFTTSERVVLTCELSRVDFPASWYKDGQKVEESESLVVKMDGRKHRLIMPEAQV
QDSGEFECRTEGVSAFFSISVQDPPVHILDPREHVFVHAITSECVMLTCEVDREDAPVHW
YKDGQEVEESDFVVLENEGPHHRLVLPAAQPPDGGEFQCVAGDERAYFTVTITDVSSWIV
YPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDAVRRLVLPAV
QLEDSGEYLCEIDDESASFTVTVTEPPVRIIYPRDEVTLVAVSLECVVLMCELSREDAPV
RWYKDGLEVEESEALVLESDGPCRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTATPER
ILHPAARSLDLQFGVPGRVELRCEVAPAGSQVRWYKDGLEVEASDALQLGAKGPTRTLTL
PHAQPEDAGEYVCETRDEAVTFNVSLAEPPVQFLAPEAAPSPLCVAPGEPLVLSCELSRA
GALVFWSHNGRPVQEGEGLELQAEGPRRILCIRAADPVHAGLYTCQAGAAPGAPSLSFTV
QVAEPPVRVVDPEAAQTRVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQD
GARQVLRVQRARSRDAGEYLCDTPQDSRIFLVSVEEPPPVKLVSELTPLTVHEGDDATFR
CEVSPPDADVTWLHNGAIVTPGPQLEMAQNGSSRILTVRGCQLEDAGTVTAQAGGTSTSA
RLHVRETELLFLRRLQDVRAEEGQDVCLEVETGRVGAAGAVRWVRGGAPLPPDSRLSTAQ
DGHVYRLFIHGVVPADQGTYGCESHHDRTLARLSVKPRQLRVLRPLEDVTVIEGGSATFR
LELSQEDVTGEWARGGVRLQPGTTCQIHAEGHAHCLVLSGLGLADSGCISFTADALRCAA
RLTVREAPVTIVRGPQDLEVTEGDTATFECELSQALADVTWEKDGQPLTPSPRLRLQALG
TRRLLQLRRCGPLDAATYSCVVGMARAGPVHLVVRERKVSVLSDLLSVRAREGDGATFEC
TVSEVEPTGSWELGGRPLRPGGRVRIRQEGKKHILVLSVLRAEDTGEVRFQAGPAQSVAQ
LEVEALPLQICRRPPREKTVLVGRRAVLEVTVCRSGGQVCWLREGVALCPGDKYELRSHG
HTHSLVIHDVRPEDQGTYCCQAGQDSAHTRLLVEGGAPLST
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggctcgggggaccaggggagccccccgtgcttcctgcgcttcccgcggccc
gtgcgggtggtaagtggcgctgaggccgagctcaagtgcgtggtgcttggggagccgccg
cccattgtcgtgtgggagaagggcgggcagcagctggcggcctcggagcgcctgagcttc
ccggcggacggcgccgagcacggcctgctgctgagcggcgcgctgcccaccgacgcgggg
gtctacgtgtgccgcgcccgcaatgcggccggagaggcctacgcggcggccgccgtcacc
gtgctggagccgccggcccccgagcgcgagccccagcctgccgaacgcccgcggccgccg
cccggggccggggagggcgccccggtgttcctgacggggccccggtcccagtgggtgctg
cggggggcggaggtggtgctggagtgccaggtggggggcctccccgcgccaacgctgtac
tgggagaaggacgggatggcgctggacgaagtgtgggacagtagccacttctccctcgaa
cctggccgcgccgagggccgcccgggcgcgagcctggcgctgcgcatcctggcggcgcgg
ctgcccgactccggcgtctacgtgtgccacgcccgcaacgcgcacggccacgcgcgggcc
ggcgcgctgctgcaagtgcagcagccccccgagagcccgcccgaggacccggacgaggcc
cccaaccccgtggtggagccgctcaagtgcgcgcccaagaccttctgggtgaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcccgagcccgagatcgaatggcac
tgggagggccacccgctgctccctgaccgccgccgcctcatgtaccgcgaccgcgatggc
ggcttcgtgctcaaggtgctctactgccaggccaaggatcgcgggctctacgtgtgtgcc
gcgcgcaactcggcgggccagaccctcagtgccgtgcagctgcatgtcaaagagcctcgc
ctccgcttcacgaggcccctgcaggacgtggagggccgggagcatgggattgtggtgctg
gagtgtaaagtccccaactcccgcattcccacggcctggttccgcgaggaccagcggctg
ctgccctgccgcaagtacgagcagatcgaggagggcactgtccggcgcctcatcatccac
aggctgaaggcagatgacgacggagtttacctgtgcgagatgcgcggccgggtgcgcacc
gtggccaacgtgacagtcaaagggcccatcctgaagcggctgccccggaagctcgatgtt
tttgagggagagaacgcggtgctgctggtggagacctgcgaggctggggtggaagggcgc
tggagtcgagatggggaggacctgccggccacctgccagagcagctccggccacatgcat
gccctggtcctgccaggggtcacccgagaagatgctggcgaggtcaccttcagcctgggc
aattcccgtaccaccactctgctcagagtcaaatgcgtcaagcacaatcccccgggaccc
ccagtgttggcagaaatgttcaagggccacaagaacacggtcctgctgacctggaagcct
cccgagccagttcccgagacccccttcatctaccggctggaacggcaggaggtgggctca
gaagactggatccagtgcttcagcattgagaaagctggggctgtggaggtgccgggagac
tgtgtgccctccgagggtgactaccgcttccgcgtctgcaccgtcagcgaacacggccgc
agttcccatgtcgtgttccatgggtctgctcacctcgtgcccacagctcgcctggtggcc
ggtctggacgacgtgcaggtatatgacggggaagatgccgtcttctccctcgatctctcc
accatcatccagggcacctggttccttaatggggaagagctcaagagtaatgagccagag
ggccaggtagagcctggggccctgcggtaccggatggagcagaagggcctgcagcacaga
ctcatcctgcaagctgtcaggcaccaggacagcggggccctggttggcttcagctgcccg
ggtgtgcaggactcggctgccctcaccatccaagagagcccggtgcacatcctgagcccc
caggacaaggtgtcgttgaccttcacaacctcggagcgggtggtactgacctgtgagctc
tcccgggtggacttcccagcgagctggtacaaggacgggcagaaggtggaggagagcgag
tcgctggtggtgaagatggatgggcgcaaacaccgcctgatcatgcctgaggcccaggtc
caggacagtggcgagtttgagtgcagaacggaaggggtctcagccttcttcagcatctcc
gtccaagacccccccgtgcacatcctggatccccgggagcacgtgtttgtgcatgccata
acctccgagtgcgtcatgctgacctgtgaggtggaccgggaggacgcccccgtgcactgg
tacaaggacgggcaggaggtagaagagagcgacttcgtggtgctggagaacgaggggccc
catcaccgcctggtgctgcccgccgcccagcctccagatgggggcgagttccagtgcgtc
gctggggacgagcgcgcctacttcaccgtgaccatcacagatgtctcctcgtggatcgtg
taccccagcggcaaggtgtatgtggcagccgtgcgcctggagcgtgtggtgctgacctgc
gagctctgccggccctgggccgaggtgcgctggaccaaggatggcgaagaggtagtggag
agtcccgcactgctcctgcagaaggaggacgccgtccgccgcctggtgctgcccgccgtc
cagctggaggactcgggcgagtacttgtgtgaaatcgatgacgagtctgcctctttcacc
gtcactgtcacagaacccccagtgcgcatcatatacccccgggacgaggtgaccttggtc
gccgtgagcttggagtgtgtggtgctgatgtgtgagctgtcgcgggaggacgcccccgtg
cgctggtacaaggatgggctggaggtggaggagagtgaggccctggtgctggagagtgac
gggccctgccgccgcctggtgctgcctgctgcccagcccgaggacgggggcgagttcgtg
tgcgacgctggagacgactcagccttcttcactgtcaccgtcacagccactccagagagg
attttgcatccggcggcccgctccctggacctgcagttcggggttccagggcgcgtggag
ctgcgctgcgaggtggccccggctgggtcccaggtgcgctggtacaaggatgggctggag
gtggaagcatcagatgccctgcagctgggtgccaaggggcccactcgcaccctgaccctg
ccccacgcccagcctgaggacgccggggagtatgtgtgtgagactcgtgatgaagccgtc
accttcaacgtcagcctggctgagcccccagtccagttccttgccccagaggcagccccc
agcccgctctgcgtggcccccggggagccactggtgctgagctgtgaactgtcccgggct
ggcgccctcgtcttctggagccacaacgggaggccggtgcaggagggtgagggtctggag
ctccaagccgagggcccccgccgtatcctctgcatccgggctgcagacccggtccacgca
ggcctctacacctgccaggcaggggcagccccgggggcgcccagcctcagcttcaccgtc
caagtggctgagccccccgtgcgggtggtggaccccgaggcagcccagacaagggttcgc
agcaccccaggcggggacctggagctggtggtgcacctctccgggccgggaggccctgtg
cgctggtacaaggacggggagcgcctggcaagccaggggcgggtgcagctggagcaggac
ggggcgaggcaggtgctgcgggtacagagggcccggagcagggacgccggggagtacctg
tgcgacacgccccaggacagccgcatcttcctcgtcagcgtggaagaaccaccgccggtg
aagctggtctcggagctgacaccactaactgtccacgagggtgatgatgccacgttccgg
tgtgaagtctccccaccggacgccgacgtcacttggttgcacaatggggccattgtcacc
ccagggccccagctagagatggcccagaatgggtcaagccgcatattgaccgtgcgaggc
tgccagctcgaggacgcggggaccgtgactgcccaagcagggggcacatccacaagtgcc
cggctccacgttcgagagacggagctgctcttcctgcggcggctgcaggacgtgcgggca
gaggaaggccaggacgtgtgcctcgaagtagagacaggccgagtgggtgcggcaggggcc
gtgcgctgggtgcgaggtggggcacccctaccacccgactcccgcctgtccacggcccag
gatggccacgtctaccgcctcttcatccacggcgtcgtaccagccgaccagggcacctac
ggctgcgagagccaccacgatcgcaccctggccaggctcagcgtgaagccaaggcagcta
agagtgctgcggcctctggaggatgtgaccgtcatcgaggggggcagcgccaccttccgg
ctggagctgtcccaggaggatgtgaccggggagtgggcccggggtggagtccggctgcag
ccagggaccacgtgccaaattcacgcagagggccacgctcactgcctggtactcagtggc
ctgggcctggccgattcgggctgcatctccttcactgcggatgccctgcgctgtgcagcc
agactcactgtgagagaggccccagtgaccattgtgcgggggccacaggacctagaagtg
accgagggtgacacagctactttcgagtgtgaactttcccaggccttggctgatgtcacc
tgggagaaggacgggcaaccgctcacccccagccctcggctcagactccaggccctcggc
acccgccgccttctccagctgcggcgctgcggtcccttggacgccgcgacctacagctgc
gtggtggggatggcccgagccgggcccgtccacctggtggttcgcgagcgcaaggtgtct
gtcctctccgaccttctgtcggtgcgcgcccgcgaaggcgacggagccacgttcgagtgc
accgtgtcggaggtcgagccaaccgggagctgggagctcggaggccgcccgctgagaccc
ggaggccgcgtccgcatccgacaggaagggaagaaacacattctggtgctgagcgtgcta
cgcgcggaggacactggtgaggtccgcttccaggcgggacccgcccagtccgtggctcag
ctggaggtggaggcattgcctctccagatatgccgccgcccccctcgcgagaagacagtt
ctggtcggccgccgggcggtgctggaggtgactgtgtgccgctcggggggccaagtgtgc
tggttgcgggagggggtggcgctgtgcccgggagacaagtacgagctgcgcagtcatggc
cacacccacagcctggtcatccatgacgtgcgacctgaggaccagggcacctactgctgc
caggccggccaggacagcgcccacacacggctgctggtagagggaggtgcccccctctcc
acctga
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