Phocoena phocoena (harbor porpoise): 136125530
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Entry
136125530 CDS
T11058
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04810
Regulation of actin cytoskeleton
pphc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
136125530 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136125530 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136125530 (CYFIP1)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136125530 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
136125530 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
LRIF1
zf-CW
Motif
Other DBs
NCBI-GeneID:
136125530
NCBI-ProteinID:
XP_065736384
LinkDB
All DBs
Position
7:1966635..2061048
Genome browser
AA seq
1253 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQVIHQQLEVISGYEELLAD
IVNLCVDCYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMVQIREDHMRFI
SELARYSNNEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSTAMYKSL
ELAIGRFESEDLTSIVELDGLLEINRMTHRLLSRYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKVC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDDCVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaggtgacgctggaggatgcgctgtccaacgtggacctgttggaagagctg
cctctgcccgaccagcagccctgcatcgagcccccgccatcctcactgctctaccagcca
aatttcaacaccaattttgaagacagaaatgcatttgtcactggcattgcaagatacatt
gaacaagcgaccgtccactctagcatgaacgagatgctggaggaaggccaagagtatgcc
gtcatgctgtacacctggaggagctgctctcgggccatcccgcaggtgaaatgtaacgaa
cagcctaacagagtggaaatttatgagaaaaccgtggaggtccttgagcctgaggtcaca
aaactgatgaattttatgtacttccagagaaacgccatcgagcgtttttgtggggaggtg
aggcgcctgtgtcacgcggagagaaggaaggacttcgtgtctgaagcctacctgatcacc
ctgggcaagttcatcaacatgtttgccgtgctggacgagctgaagaacatgaagtgcagc
gtgaagaatgaccactcagcctacaagagggctgctcagtttttacgtaaaatggcagat
ccacagtccatccaggaatcacagaatctgtccatgttcctggccaaccacaacaagatc
acacaagtaattcaccagcagctcgaagtgatttctggctatgaagagctcttagcagac
attgtgaatctgtgtgtggactgctatgagaacaggatgtacttgacgcccagtgagaaa
cacatgcttctcaaagtcatggggtttggtctgtacctgatggatgggagtgtcagcaac
atttataaactagatgccaagaaaagaataaacttatccaaaatcgacaagtacttcaag
cagctccaggtggttccgctgttcggggacatgcaaatagaactggcaagatatatcaag
accagcgcccactatgaggaaaataaatctcgatggacgtgcacgtcctccagcagcagc
ccacagtacaacatctgcgagcagatggtacagatccgggaggaccacatgcgcttcatc
tcggagctggcgcgctatagcaacaacgaggtggtcacaggctcaggccgccaggaggct
cagaagacggatgctgagtaccggaagctcttcgacctggcgctgcagggcttgcagctg
ctgtcccagtggagtgctcacgtgatggaagtgtattcgtggaaacttgtgcacccaacg
gacaagtactccaacaaggactgccctgacaacgccgaggagtatgaacgtgccacccgc
tacaactacaccagcgaggagaagttcgccctggtggaggtgatcgccatgatcaaaggc
ttgcaggtgctgatgggcaggatggagagcgtgttcaaccatgccatccgccacactgtc
tacgccgcgctgcaggacttctcccaggtcaccctcagggagccgctcaggcaggccatc
aagaagaagaaaaacgtcatccagagtgtcctgcaggccatcaggaagaccgtgtgtgac
tgggagacagggcacgagcccttcaacgacccggccctgcggggcgagaaggaccccaag
agcggctttgacattaaagtgccacggcgcgccgtgggaccctctagcacccagctttac
atggtgagaaccatgctagagtccctcattgcagacaaaagtggttccaagaaaaccttg
agaagtagcctcgaggggcctaccatattggacatagaaaaatttcatcgcgagtcattc
ttctacacccacttgataaatttcagtgagacgctccagcagtgctgtgacctttcgcag
ttgtggttccgagagttcttcctggagctgaccatgggcaggaggatccagttccccatc
gagatgtccatgccctggatcctgacagaccacatcctggagaccaaggaagcgtcgatg
atggagtacgtcctctactcgctggacctgtacaacgatagcgcccactatgccctcacc
aggttcaacaagcagtttctctatgacgaaatcgaggcagaggtgaatctctgctttgac
caatttgtttataagctggccgaccagatatttgcatattataaggttatggcaggaagt
ttgcttcttgacaaacggttacgatcagaatgcaagaatcagggtgcaaccatccatctc
ccgccatctaatcgctatgagacgctgctcaagcagaggcacgtgcagctcctgggcagg
tccatagacctcaatcgtctgattactcagcgcgtctccaccgccatgtacaaatccctg
gaactggcgattgggcgatttgagagtgaagacctgacatcaatagttgagctggatggc
ctcttggaaatcaaccgcatgacccacaggctgctgagcaggtacctgactctggacagc
tttgacgccatgttccgggaggccaaccacaatgtgtcagcgccctacgggagaatcacc
ctccacgtcttctgggagctcaactacgacttcctgcccaactactgctacaatggctcc
accaaccgatttgttcggacagtattaccattttctcaagaatttcaaagagataaacag
ccaaatgcacaaccccagtatttgcatggatcaaaggctttgaacctggcctactcaagc
atctacggcagctaccggaactttgtggggcctccacacttccaggtcatctgccggctg
ctcggctaccagggcatcgcagtggtcatggaagagctgctgaaggtggtcaagagcctg
ctgcaaggcacaatcctacagtacgtgaagacgctgatggaggtgatgcccaaggtctgc
cggctgccgcggcacgagtacggctcccctggcatcctggagttcttccaccaccagtta
aaggacattgttgagtatgcagagctgaagacggtgtgcttccagaacctacgggaggta
ggcaacgccatcctcttctgcctgctcatagagcagagcctgtctttagaagaagtatgt
gacctgctgcacgcagcccctttccagaacatcttaccaagagtccacgtgaaagaggga
gagagacttgatgccaaaatgaaaagactagaatcaaagtatgccccactgcatcttgtc
cctctaatcgaaagactgggaacccctcagcaaattgcaatagcaagagagggggacttg
ctgacgaaggagcgcctctgctgtggcctgtccatgtttgaagtcatcctgactcggatc
cggacctttctggacgaccccatctggcgtgggcccctgcccagcaatggggtcatgcac
gtggatgactgtgtcgagtttcacagactgtggagcgccatgcagtttgtctactgcatt
cctgtgggaacacacgagtttacagtcgagcagtgttttggcgacgggctccactgggct
ggctgtatgatcattgtgcttcttgggcagcagcggcgctttgctgtactggatttttgc
taccatctactcaaagtccaaaaacatgatggcaaggatgaaattatcaaaaacgtgcct
ttgaagaagatggtggagagaattcgcaagttccagattctgaatgatgagattatcact
atcttggacaagtacttgaagtcgggcgatggagagagcacgcctgtggaacacgttcgc
tgctttcagccacctatccaccagtctctggccagcagctga
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