Phocoena phocoena (harbor porpoise): 136125624
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Entry
136125624 CDS
T11058
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136125624 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
136125624 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
EGF_Teneurin
cEGF
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
136125624
NCBI-ProteinID:
XP_065736573
LinkDB
All DBs
Position
7:114680650..114767408
Genome browser
AA seq
1413 aa
AA seq
DB search
MPRGAAWALLLAAALGLGARGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVPF
PFFGAEHSGLYVNNNGIVSFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDAATLRRATDDVRRYFPELPGFSATWVFIATWYRVTFFGGSSSSPVNTFQTVLITDGK
LSFTIFNYESITWTTGTHASSGGDAAGLGGIAAQAGFNAGDGRRYFSIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLTLRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFICQCPVGFGGPTCETARSPCDATECEN
GGWCQAEGGSAACVCAAGYTGAACETDVDECGSDPCLNGGSCVDLVGNFTCLCSEPFEGP
RCETGSHPVPDACLSAPCQNGGTCVDAEQGYVCECPEGFMGLDCRERTPNNCECRNGGRC
LGANTTLCQCPPAFFGLLCEFEVTAMPCNVNTQCPDGGHCMEYGGSYLCVCHTDHNVSHS
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCKEAGG
EYRCDCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCERAPSP
CFRSPCMNGGTCEALGTDFSCRCQAGYTGRRCQAEVDCGPPEEVTHATLRFNGTRLGSVA
LYSCDRGYSPSTSNHIRVCQPQGVWSEPPQCHEIDECRSQPCLHGGSCQDRVAGYLCVCS
PGHEGARCELETDECLTQPCRNGGSCRDLPGAFVCQCPPGFVGVHCETEVDACDSRPCQH
GGRCENGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKAGYTGK
DCAKELFPPTALKVERVEESGVSISWHPPEGPAARQMLDGYAVTYASSDGSYRRTDFVDR
GRSSHQLRALAAGRAYNISVFSVKRNANNKNDISRPVVLLTRTRPRPVEGLEVTNVTASA
ISVRWALHRIRHATVSSVRVSIRHPKAQEDESTDVDKGVDKFTFRALLPGRRYTIWVTAL
SGPGGQEHPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDAPTPGTSLEAYVINV
TTSQSSKSRYVPNGRLVSYTVRDLRPGRRYQLSVTAVQSAGGDQLHSEPAHLYIITSARD
GADRRWHREGLPPRALRTRPAPARLPELRLLNDPGAPATPTQAPRFSELVDGRGRVSASF
RSSPGRRVTVRSQPTALVQLENAEEVPEQVSLALQLPGRSGDKGVENAPGNCSDNPCQNG
GTCVPGEHAHSCDCTPGFKGRHCELACRKVPQPCTRLFSETKSFPVWEGGVCHHVYKRVY
KVHPDTCFKESCESTRARTPDRKQSNSPTLKKS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggcgccgcctgggcgctgctcttggccgcggccctggggctcggggcgcgc
ggcgtgcgcggcgctgtggccctagccgacttctacccgttcggcgcggagcgcggcgac
gccgtcacccccaagcaggacgacggcggctccgggctgcggccgctctccgtgcccttt
ccgttcttcggcgccgagcactccggcctctacgtgaacaacaacgggatcgtctccttc
ctgaaggaggtttctcagttcaccccagtggccttccccatcgccaaggaccgctgcgtg
gtggcggccttctgggcggacgtggacaaccggcgtgcaggcgacgtgtactaccgggag
gccaccgacgcagccacgctgcgcagggccacagatgatgtcaggcgctacttccccgag
ctcccaggcttctccgccacctgggtgttcatagccacctggtaccgcgtcaccttcttc
ggaggcagctcctcttcccccgtcaacacgttccagaccgtgctcatcaccgacggcaag
ctctctttcaccatcttcaactacgagtccatcacgtggaccacgggcacgcacgccagc
agcgggggcgacgccgctggtctggggggcatcgcggcccaggccggcttcaatgcgggt
gatgggcggcgctacttcagcatccccggctcacgcacagcggacatggcggaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctccgtgtgcctgaccctgcgcccctgcctcaac
ggcggcaagtgcatcgacgactgcgtcacgggcaacccctcctacacctgctcctgcctc
tcgggcttcacggggcggaggtgccacctggatgtgaacgagtgtgcttcccacccgtgt
cagaacggcgggacctgcacgcacggcgtcaacagcttcatctgccagtgcccagtgggc
ttcgggggacccacctgtgagacagcacggtctccgtgcgatgccacagagtgtgagaac
ggcggctggtgccaggcggagggcggctccgcggcgtgcgtgtgcgcagccggctacacg
ggtgcggcctgcgagacggacgtggacgagtgcggctctgacccctgcctgaacggaggg
tcgtgtgtcgacctggtggggaatttcacctgcctttgttcagagcccttcgagggacct
cgctgcgagacaggaagccacccggtgcccgacgcctgcctctcggccccctgccagaac
gggggcacctgtgtggatgcggagcagggctacgtgtgtgaatgccccgaaggcttcatg
ggccttgactgcagggagagaacccccaacaactgtgagtgccgcaatggtggcaggtgc
ctgggggctaacaccaccctctgccagtgccctccggccttctttgggctcctctgcgaa
tttgaggtcacggccatgccctgcaacgtgaacacgcagtgccccgatggcggccactgc
atggagtacggcgggagctacctgtgcgtctgccacaccgaccacaacgtcagccactcg
ctgccgtccccctgcgactcagacccctgcttcaacggaggctcctgtgatgcccacgat
gactcctacacgtgcgagtgcccgcggggcttccacggccggcactgcgagaaagcccgg
ccgcgcctgtgcagctcggggccctgcaggaacggcggcacgtgcaaggaagcgggcggc
gagtaccgctgcgactgcccctaccgcttcaccggaaggcactgcgagatcgggaagcca
gactcatgcgcctctggcccctgtcacaacggcggcacctgtttccactacatcggcaaa
tacaagtgtgactgtcccccaggcttctcgggacggcactgcgagagagccccctctccc
tgcttccggagcccgtgcatgaatgggggtacctgcgaggccctggggacagacttctcc
tgccgctgtcaagcaggttacaccggacgccggtgccaggcagaggtggactgcggcccg
cccgaggaggtgacacacgccaccctgcgcttcaacggcacccggctgggctcggtggcc
ctctactcgtgtgaccgaggctacagcccgagcacctccaaccacatccgcgtctgccag
ccgcagggcgtctggagtgagcctccccagtgccacgaaattgacgagtgccgatcccag
ccgtgcctgcatgggggctcctgccaggaccgcgtcgctgggtacctgtgtgtctgcagc
ccagggcatgaaggagcccgctgcgagctggagacagacgagtgcctgacgcaaccctgc
agaaacggaggctcctgcagggacctcccgggggcctttgtctgccagtgccccccaggc
ttcgttggagtccactgcgagacagaggtggacgcctgcgactccaggccctgccagcac
ggaggccggtgtgagaacggtggcggggcctacctgtgtgtctgcccagagggcttcttc
ggctaccactgcgagacagtgagcgacccctgcttctccagcccctgtgggggccgcggc
tactgcctggccagcaacgggtcccacagctgcacctgtaaagcgggctacacgggcaag
gactgtgccaaagagctcttcccaccaacggccctcaaggtggagcgagtggaggagagc
ggggtctccatctcctggcacccacccgaaggcccagccgcccggcagatgctcgatggc
tacgcggtcacctacgcctcttccgatggctcctaccgccgcacggacttcgtggaccgg
ggccgctcctcgcaccagctccgggccctggcggccggcagggcttacaacatctccgtc
ttctcggtcaagcgcaatgccaacaacaagaacgacatcagcaggcccgtggtgcttctc
acccgcacgcgaccccgccccgtcgagggccttgaggtcaccaacgtgactgccagcgcc
atctcggtgcgatgggctctgcacaggatccgccacgccaccgtcagcagcgtccgcgtg
tccatccgccaccccaaggcccaggaggacgagtccaccgacgtggacaagggtgtggac
aagttcacattcagggccctgcttccaggaaggagatacaccatctgggtgactgccctc
agcgggcctggggggcaggagcaccccaccgagagcctggcctcggcgccgctgcacgtg
tggacccggcctctgccgccagccaacctgaccgccgcccgagtcacggccacctccgcc
cacgtagtctgggatgcccccactccgggcacctcactggaggcctacgtcatcaacgtg
accaccagccagagcagcaagagccgctacgtccccaacgggaggctggtgtcctacaca
gtgcgggacctgcggcctggacggcggtaccagctgtcagtgacggccgtgcagagcgcc
gggggcgaccagctacacagcgagcccgctcacctgtacatcatcacctccgcgagggac
ggcgccgacagacgctggcaccgggaaggactccccccgcgggcgctcagaacccgaccg
gcccccgcgcgcctgccggagctgcgtctgctcaacgaccccggcgcccccgcaacgccg
acccaggcccccaggttctcggagctcgtggacggcagaggacgagtgagcgccagcttc
cgcagctcgcctggcagacgggtcaccgtgagatcacaacccacggctctggtgcagctg
gagaacgcggaggaggtccccgagcaggtcagcctggccctccagctccccggacgcagt
ggtgacaagggcgtggaaaatgcccctgggaactgctcagacaacccctgtcagaacgga
ggcacctgtgtgcctggtgagcatgcccacagctgtgactgcaccccggggttcaaaggc
agacactgtgagcttgcctgtagaaaggtgccccagccctgcacacggctgttctcggag
acaaagtcctttccggtctgggaaggaggcgtctgtcaccacgtgtataaaagagtctac
aaagtgcatccagacacctgtttcaaagagagctgtgagagcacgcgcgccaggacccca
gacaggaaacaaagtaacagtcctacactgaagaaatcttaa
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