Phocoena phocoena (harbor porpoise): 136125955 Help Entry 136125955         CDS       T11058                                  Symbol FN1 Name (RefSeq) fibronectin isoform X1   KO K05717   fibronectin 1 Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04151   PI3K-Akt signaling pathway pphc04510   Focal adhesion pphc04512   ECM-receptor interaction pphc04518   Integrin signaling pphc04810   Regulation of actin cytoskeleton pphc04820   Cytoskeleton in muscle cells pphc04933   AGE-RAGE signaling pathway in diabetic complications pphc05100   Bacterial invasion of epithelial cells pphc05135   Yersinia infection pphc05146   Amoebiasis pphc05165   Human papillomavirus infection pphc05200   Pathways in cancer pphc05205   Proteoglycans in cancer pphc05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:pphc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     136125955 (FN1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136125955 (FN1)    04518 Integrin signaling     136125955 (FN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     136125955 (FN1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     136125955 (FN1)    04810 Regulation of actin cytoskeleton     136125955 (FN1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     136125955 (FN1)    05205 Proteoglycans in cancer     136125955 (FN1)   09162 Cancer: specific types    05222 Small cell lung cancer     136125955 (FN1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     136125955 (FN1)   09171 Infectious disease: bacterial    05135 Yersinia infection     136125955 (FN1)    05100 Bacterial invasion of epithelial cells     136125955 (FN1)   09174 Infectious disease: parasitic    05146 Amoebiasis     136125955 (FN1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     136125955 (FN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pphc04131]     136125955 (FN1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pphc04147]     136125955 (FN1)    00536 Glycosaminoglycan binding proteins [BR:pphc00536]     136125955 (FN1)    04990 Domain-containing proteins not elsewhere classified [BR:pphc04990]     136125955 (FN1) Membrane trafficking [BR:pphc04131]  Endoplasmic reticulum (ER) - Golgi transport   Forward pathways    ER-Golgi intermediate compartment (ERGIC) proteins     136125955 (FN1) Exosome [BR:pphc04147]  Exosomal proteins   Exosomal proteins of bladder cancer cells    136125955 (FN1) Glycosaminoglycan binding proteins [BR:pphc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136125955 (FN1) Domain-containing proteins not elsewhere classified [BR:pphc04990]  Fibronectin (FN) domain-containing proteins   Fibronectin type I domain-containing proteins    136125955 (FN1) SSDB OrthologParalogGFIT Motif Pfam:  fn3 fn1 Fn3_PBP1 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N fn2 Fn3_Dep-1_2nd Fn3_VIN3 Fn3_Dep-1_3rd NDNF DUF8447 FN3_Tor_3rd Motif Other DBs NCBI-GeneID:  136125955 NCBI-ProteinID:  XP_065737044 LinkDB All DBs Position 7:complement(93329253..93397655) Genome browser AA seq 2393 aa AA seqDB search MLGDPRPRLLLLLTVLSLGTAVPSTGASKSKRQAQQVIQPQSPLAVSQSKPGCYDNGKHY QINQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS YRIGDTWRKKDNRGNLLQCICTGNGRGEWKCERHTTLQTTSAGSGSFTDVRTAIYQPQPH PQPAPYGHCVTDSGVVYSVGMQWLKAQGNKQMLCTCLGNGVSCQETAITQTYGGNSNGEP CVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGAL CHFPFLYNNQNYTDCTSEGRRDNMKWCGTTRNYDADQKFGFCPMAAHEEICTTNEGIMYR IGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGH MLNCTCFGQGRGRWKCDPIDQCQDSESRTFYQIGESWEKFLHGVRYQCYCYGRGIGEWGC QPIQTYPGSTGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWKPKNSPDRWKEATI PGHLNSYTIKGLRPGVVYEGQLISVQHYGQREMTRFDFTTTSTSPVVTSNTVTGETTPFS PVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPD LLPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPTVDQVDNTSIVVRWSRPQAPIT GYRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETT GVPRSDKVPPPRDLQFVEVTDVKITIMWTPPESAVTGYRVDVIPVNLPGEHGQRLPISRN TFAEVTGLSPGVTYHFKVFAVNHGRESKPLTAQQATKLDAPTNLQFINETDTTIIVTWTP PRARIAGYRLTVGLTRGGQPKQYNVGPSSTQYPLRNLQPGSEYSATLVAVKGSQQSPRVT GVFTTLQPLSSIPPYHTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIV VSGLTPGVEYIYTISVLKDGQERDTPIVKKVVTLLSPFPFEGTSLELSLIGSGSQMFWAV TSSFLFSPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDD KESVPISDTIMPAVPPPTDLRFTNVGPDTMRVTWAPPPSIELTNLLVRYSPVKNEEDVAE LSVSPSDNAVFLTNLLPGTEYLVSVSSVYEQHESVPLRGRQKTGLDSPTGIDFSDITANS FTVHWIAPRATITGYKIRHHPEHMGGRHREDRVPPSRNSITLTNLNPGTDYVVTIVALNG KEESPSLVGQQTTVSDVPRDLEVIAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE FTVPGSKSTATISGLKPGADYTITVYAVTGRGDSPASSKPISIDYRTEIDKPSQMQVTDV QDNSISVRWLPSSSPVTGYRVTTTPKNGPGPSKTMTAGPDQTEMTIEGLQPTVEYVVSVY AQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGI HELFPAPDGEEETAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIPAPTNLKFTQV SPTSLAAQWTAPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVY ALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAIPANG QTPIQRTIKPDVRSYTITGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLHFLA TTPNSLLLSWQPPRARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGIEYTIQV IALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEILDVPSTVQKTPFITNPGYDTGNG IQLPGTSGQQPSLGQQMIFEEHGFRRTTPPTMASPVRHRPRPYPPNVNEEIQIGPVPRGD VDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCHPVGIDEEPLQFRVPGT SASATLTGLTRGATYNIIVEAIKDQKRHKVREQVVTVGNSADQGLNQPTDDSCFDPYTVS HYAIGEEWERLSESGFKLSCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGESGQM MSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQRGWRCDNC RRPGAEPGHEGSTGHSYNQYSQRYHQRTNTNVNCPIECFMPLDVQADREDSRE NT seq 7182 nt NT seq  +upstreamnt  +downstreamnt atgctcggggatccgaggccccggctgctgctgctgctgaccgtcctgtccctggggaca gcggtgccctccactggagcctcgaagagcaagaggcaggctcagcaggtcattcagccc cagtccccgttggctgtcagccaaagcaagcctggttgttatgacaatgggaaacactat cagataaaccaacaatgggagcgcacctacctgggcagtgccttggtctgcacctgttat ggagggagccggggctttaactgcgagagcaagcctgaacctgaagagacttgctttgac aagtacaccgggaacacttaccgggtgggcgacacttacgagcgccctaaggactccatg atctgggactgcacctgcattggggctgggcgagggagaataagctgtaccattgcaaac cgctgccatgaagggggtcagtcctacaagattggtgacacctggaggagaccacacgag actggtggttacatgttggagtgtgtgtgtctcggtaacgggaaaggagaatggacctgc aaacccatagctgagaaatgttttgatcacgctgctgggacttcctacgttgtcggggag acctgggaaaagccttatcaaggctggatgatggtggattgtacttgtctgggagaaggc agtggacgcatcacctgtacctccagaaacagatgcaacgatcaggacactaggacatcc tatagaattggggatacctggcgcaagaaggacaatcgggggaacctgctccaatgcatc tgcactggcaacggccgtggcgagtggaagtgtgagaggcacacaaccctgcagaccacg tctgccggatctggctccttcacagacgtccgaacggccatttaccagccacagcctcac ccccagccggctccgtacggtcactgtgtcacagacagcggtgtggtttactccgtgggc atgcagtggctgaaggcacaaggaaataagcaaatgctttgcacttgcctgggcaacgga gtcagctgccaagagacagctataacccagacttatggtggcaattcaaatggggagcct tgcgtcctaccattcacctacaacggcaggactttctactcctgcaccacagaagggcga caggatggacatctctggtgtagcacaacttccaattatgagcaagaccagaaatattct ttctgtacagatcatactgtcttggttcaaactcgaggtggaaattccaatggtgccttg tgccactttcccttcctgtacaacaaccaaaactacaccgactgcacatccgagggcagg agggacaacatgaaatggtgtggaaccacacggaactatgacgctgaccagaagtttgga ttctgccccatggctgcccacgaggaaatctgtacaaccaatgaagggatcatgtatcgc attggagaccagtgggacaaacagcatgatatgggccacatgatgagatgcacatgtgtc gggaacggtcgtggagaatggacatgtgtcgcctactcccagctccgagatcagtgcatc gtcgacgacatcacatacaatgtgaatgacacattccacaaacgtcacgaagagggacac atgctgaattgtacctgcttcggtcagggcaggggccggtggaagtgcgatcccattgat caatgccaggattcagaatcccgtaccttttatcaaattggagaatcatgggagaagttt ttgcatggagtcaggtaccagtgctactgctatggccgtggcattggggagtggggctgc cagcccatacagacctatccaggttcaactggtcctgtccaagtaataatcactgagacc cccagtcagcccaactctcaccccatccaatggaatgcaccagaaccatctcacatttcc aagtacattctcagatggaaacctaaaaattctccagaccgttggaaggaagccaccatt ccgggccacttaaactcctacaccatcaaaggcctgaggccaggtgtggtatacgagggc cagctcatcagcgtccagcactacggccaaagagagatgacgcgcttcgacttcaccacc accagcacaagcccagtggtgaccagcaacaccgtgacgggagagacaacacccttttct cctgttgtggccacctccgaatccgtgactgaaatcacagccagcagctttgtggtctcc tgggtctcggcttccgacactgtgtccggattccgggtggagtatgagctgagtgaagag ggagatgaaccacagtacctggatcttcccagcacagccacttctgtgaacatccctgac ctgcttcctggccgaaaatacattgtgaatgtctatcagatatccgaagaaggagaacag agtttgatcctgtctacctcacagacaacagcacctgacgcccctcctgaccctaccgtg gaccaggttgataacacctcgattgtcgttcgctggagcagaccccaggcgcccatcaca ggatacagaatcgtctactccccatcagtagagggtagtagcacagaactcaaccttcct gaaactgccaactctgtcactctcagtgacttgcagcctggtgttcagtataacatcact atctacgctgtggaagaaaatcaagagagtactcctgtcttcatccaacaagaaaccact ggtgtcccacgttcagataaagttccccctcccagagacctgcagtttgtggaggtgacg gacgtaaagatcaccatcatgtggacacctcccgagagcgcggtgactggttaccgagtg gacgtgatccccgtcaacctgcccggggaacacgggcagaggctgcccatcagcaggaac acatttgcagaagtcactgggctgtcccctggggtcacctatcacttcaaagtcttcgcc gtgaaccacgggagggagagcaagcctctgacggcacaacaggcgaccaaattggatgct cccaccaacctccagtttatcaatgaaactgacaccaccatcatagtgacctggactcca cctcgtgcccggatagccgggtaccgactgactgtgggcctgacccgtggaggccagccc aagcagtacaacgtaggtccctcgtccacgcagtacccactgaggaatctgcagcctggc tccgagtactctgcaaccctcgtggccgtgaaaggcagccagcagagccccagagtcact ggagtcttcaccactctgcagcctctgagctccatcccaccttaccacacagaagtgact gaaaccaccattgtgattacatggacacctgctccaaggattggttttaagctgggtgta cgaccaagccagggaggggaagcaccacgagaagtgacctcagagtcaggaagcatcgtt gtgtctggcctgactccaggagtggaatacatttacaccatctcagtcctgaaagacggg caagagagagatacaccaattgtgaagaaagtggtgacactcctctccccattccctttc gagggtacatcgttggagttgagtttaataggctctgggtcacaaatgttctgggcagta acttcctcctttctgttttctccagatattactggctatagaattaccaccacccctaca aatggtcagcagggatattctttggaagaagtggtccatgccgatcagagttcctgcact tttgaaaacctgagtcctggcctggagtacaatgtcagtgtttacactgtcaaagatgac aaggaaagtgtccctatctctgataccatcatgccagctgtccctcctcccactgacctg cgatttaccaatgttggtcccgacacgatgcgtgtcacctgggccccacctccatccatt gaattgaccaacttactggtgcgctactcgcctgtgaaaaatgaggaggatgttgcagaa ttgtcagtttctccttcagacaatgcagtgttcttaacaaatctcctgcctggaacagag tatttagtcagcgtctccagtgtttacgagcagcatgagagcgtacctcttagaggaaga cagaaaacaggtctcgattccccaactggcattgacttttctgatatcactgccaactct ttcactgtccattggattgctcctcgagctaccatcactggctacaagatccgccatcat cctgagcacatgggtggaagacatcgggaggatcgagtgcccccctctcggaattccatc acactcaccaatctcaatccgggcacagattatgtggtcaccattgtcgctcttaatggc aaagaggaaagtccttccttggttggccagcaaacaacagtttctgatgttccaagggac ctggaagtcattgctgcaacccccactagcctgttgatcagctgggatgctccggccgtt acagtgagatattacaggatcacctatggagaaacaggaggaaatagccctgtccaggag ttcactgtgcctgggagcaagtctacagctaccatcagtggtcttaaacctggagcagac tacaccatcaccgtttatgctgtcactggccgtggggacagcccggcaagcagcaagccc atttccattgattaccggacagaaattgacaaaccatcccagatgcaagtgactgatgtc caggacaacagcattagtgtcaggtggctgccttcaagttcccctgttaccggttacagg gtgaccactactcctaaaaatggcccaggaccatcaaaaacaatgactgcaggtccagat caaacagaaatgacaattgaaggcttgcagcccacagtggagtacgtggttagcgtctac gctcagaatcgaaacggagagagtcagcctctggttcagacagcagtaaccaacattgat cgccctaaaggactggcattcactgatgtggatgtcgattccatcaaaattgcttgggaa agcccacaggggcaagtttccaggtacagggtgacctactcgagccctgaggatggaatc catgagctattccctgcacctgatggtgaagaagagactgcagagctgcaaggcctcagg ccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatggagagccagccc ctgattggaacccagtccacagccattcctgcaccaaccaacctgaagttcactcaagtt tcaccaaccagcctggccgcccagtggacggcacccaatgttcagctcactggatatcga gtgcgagtgacccctaaggagaagaccggaccaatgaaagaaatcaaccttgctcccgat agctcatctgtggtggtatcaggactcatggtggccactaaatatgaagtgagtgtctat gctctaaaggacactttgacgagcagaccagctcagggagtcgtcacgactctggagaat gtcagccctccaagaagggcccgtgtgacagatgctactgagaccaccatcaccattagc tggagaaccaagactgagacgatcaccggcttccaagtcgatgccatcccagccaacggc cagactccgattcagagaaccatcaagccagatgtcagaagctacaccatcacaggttta caacccggcactgactacaagatccacttgtacaccttgaatgacaatgcccggagctcc cctgtggtcatcgacgcctctactgccattgatgcaccatccaacctgcatttcctggcc accacacccaactccctgctgttatcatggcagccacctcgtgccaggattactggttac atcatcaagtatgagaagcccgggtcccctcccagagaagtggtccctcggccccgccct ggtgtcacagaagctactattactggtctggaaccaggaatcgagtacacaatccaagtc attgccctcaagaacaatcagaagagtgagcctctgatcgggaggaaaaagacagatgag cttccccaactggtaacccttccacaccccaatcttcatggaccagagatcctggatgtt ccctccacagttcaaaagacccctttcatcaccaaccctgggtatgacactggaaacggt attcagcttcctggcacttctggtcagcagcccagtcttgggcaacaaatgatctttgag gagcatggttttaggcgaaccacaccgcccacaatggccagccccgtaaggcataggcca agaccgtatccaccgaatgtaaatgaggagatccaaattggtcctgtccccaggggagac gtagaccatcatctctaccctcacgttctgggactcaatccaaatgcttctacaggacaa gaagctctctctcagacaacaatctcatggaccccattccaggaaagctctgagtatatc atttcatgtcatccagttggcattgatgaagaacccttgcagttccgagttcctggaact tctgctagtgccaccttgacgggtcttaccagaggggccacctacaacatcatagtggag gcaataaaagaccagaagaggcacaaggttcgggagcaagtagttaccgtgggcaattct gctgaccaaggcctaaaccaacccacggatgactcgtgcttcgacccctacacggtttcc cattatgccattggagaggagtgggagcgattgtctgaatctggctttaaactctcatgc cagtgcttaggctttggcagtggtcatttcagatgtgattcatctaaatggtgccatgat aatggtgtgaactacaagattggagagaagtgggaccgtcagggagaaagtggccagatg atgagctgcacgtgtcttggaaatggaaaaggagaattcaagtgcgatccccatgaggca acgtgttacgacgatgggaagacgtaccacgtgggagaacagtggcagaaagaatatctt ggtgccatttgctcctgcacgtgctttggaggccagcggggctggcgctgtgacaactgc cgcagaccaggggctgaacccggtcacgaaggctcaactggccactcctacaaccagtat tcacagagataccatcagagaacaaatactaatgtcaactgcccaattgagtgcttcatg cctttagatgtacaggctgacagagaagattcccgagagtaa

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