Phocoena phocoena (harbor porpoise): 136126090
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Entry
136126090 CDS
T11058
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136126090 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
136126090 (MATN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
136126090
NCBI-ProteinID:
XP_065737228
LinkDB
All DBs
Position
1:complement(24248612..24256494)
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AA seq
495 aa
AA seq
DB search
MRVLCGPCLVLCGLLLLQVPRVPGLALLSRGHLCRTRPIDLVFVIDSSRSVRPVEFEKVK
VFLSQVIESLDVGPNATRVGVVNYASSVKQEFPLRAHGSKAMLLQAVRRIQPLSTGTMTG
LAIQFAITKALSDAEGGRPSSPDISKVVIVVTDGRPQDSVRDVSARARASGIELFAIGVG
RVDKATLQQIASEPQDEHVDYVESYSVIEKLSKKFQEAFCLVSDLCATGDHDCEQVCLSS
PGSYTCACREGFTLNSDGKTCNGCSGGGGSSATDLVFLIDGSKSVRPENFELVKKFINQI
VDTLDVSDKLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKYL
IDNSFSVSSGARPGAQKVGIVFTDGRSQDYINDAAKKAKDLGFKMFAVGVGNAVEDELRE
IASEPVAEHYFYTADFKTINQIGKKLQKKICVEEDLCACESIVKFRTKVEGLLQALTRKL
EAVSKRLAILENRIV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggtactctgtggcccctgcctcgtactctgcggcctgctgctgctgcaggtccca
cgcgtacctggccttgcgctcctgtccagagggcacctctgccggacccggcccatagac
ctggtgttcgtcatcgacagctcacgcagcgtgcggccagtggagtttgagaaggtgaag
gtgttcctgtcccaggtcatcgagtcactggacgtggggcccaatgccacccgcgtgggc
gtggtcaactacgccagctccgtgaagcaggagttcccgctgcgggcccacggttccaag
gccatgctgcttcaggccgtgcgccgcatccagccgctgtccacaggcaccatgacgggc
ctggccatccagttcgccatcaccaaggccttaagcgatgctgagggcggtcgccccagc
tcaccggacatcagcaaggtggtcatcgtggtgacggacgggaggccccaggacagcgtg
cgggacgtgtctgcgcgggcccgggccagtggcatcgagctgttcgccatcggcgtaggc
cgtgtggacaaggccacgctgcagcagatcgccagcgagcctcaggacgagcacgtggac
tacgtggagagctacagcgtcatcgagaagctgtccaagaagttccaggaggccttctgc
ttggtgtcagacctgtgcgccacaggcgaccatgactgcgagcaggtgtgcctcagctcc
ccgggctcctacacctgcgcctgccgcgagggcttcaccctgaacagtgatggcaagacc
tgcaatggctgcagcggtggaggtggcagttcagctactgacctggttttcctaattgat
ggatccaagagtgtgcggccagagaactttgagctggtgaagaagttcatcaaccagatt
gtggacacgctggatgtgtcggacaagctggcccaagtggggctggtacagtactcaagc
tctgtgcgccaggagttccctctgggccgcttccacaccaagaaggacatcaaggcagct
gtgcggaacatgtcctacatggagaagggcaccatgaccggggctgccctcaagtacctc
atcgacaattccttcagtgtgtccagcggggccaggcctggtgcccagaaggtgggcatt
gtcttcactgatggtcggagccaggactacattaatgatgctgccaagaaagccaaggac
cttggctttaagatgtttgctgtgggtgtgggcaacgctgtggaggatgagctgagggaa
attgcctcagagcctgtggcagagcactatttctacacggctgacttcaagaccatcaac
cagattggcaagaagttgcagaagaagatctgcgtggaggaagacctgtgtgcctgcgag
tccatcgtgaaattccggaccaaagtagaggggctgctgcaggccctgaccaggaagctg
gaagctgtgagtaagcggctggccatcctggagaacagaatcgtctaa
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