Phocoena phocoena (harbor porpoise): 136126287
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Entry
136126287 CDS
T11058
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04141
Protein processing in endoplasmic reticulum
pphc04210
Apoptosis
pphc04217
Necroptosis
pphc04218
Cellular senescence
pphc04382
Cornified envelope formation
pphc05010
Alzheimer disease
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
Enzymes [BR:
pphc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
136126287 (CAPN1)
Peptidases and inhibitors [BR:
pphc01002
]
Cysteine peptidases
Family C2: calpain family
136126287 (CAPN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
136126287
NCBI-ProteinID:
XP_065737373
LinkDB
All DBs
Position
8:102933460..102958646
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AA seq
716 aa
AA seq
DB search
MAEEVITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYDQLRVHCLQSGALFRDEA
FPPVPQSLGFKDLGPNSSKTYGIKWKRPTELFSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYVGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYSIILK
ALERGSLLGCSIDISSILDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGE
VEWTGAWSDGSPEWNNVDPYVREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDTLKS
QRFRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDPDDDDYRSRESGCS
FLLALMQKHRRRERRFGRDMETIGFAVYEVPPELMGRPAVHLKRDFFLANASRARSEQFI
NLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDEKVL
SEEEIDENFKSLFRQLAGEDMEISVKELQTILNRIIGKHKDLRTKGFSLESCRSMVNLMD
RDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYEL
IITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggtcatcactccggtgtactgcaccggggtgtctgcacaagtgcaaaag
cagcgggccaaggagctgggcctgggccgccatgaaaacgccatcaagtacctgggccag
gattatgatcagctgcgggttcactgcctgcagagtggggccctcttccgtgatgaggct
ttccccccagtgccccagagcctgggcttcaaggacctgggccctaactcctccaaaacc
tatggcatcaagtggaagcgtcccacggagctgttctcaaacccccagttcatcgtggat
ggagccacccgcacagatatctgccagggagcactgggggactgttggctcctggcggcc
atcgcctcccttaccctcaatgacaccctcctgcaccgagtggttccacatggccaaagc
ttccaggatggctacgtcggcatcttccatttccagctgtggcagtttggggagtgggtg
gacgtggtggtggatgacctgctgcccaccaaggacgggaagctggtgttcgtgcactct
gcccaaggtaacgagttctggagtgctctgctggagaaggcctatgccaaggtgaatggc
agctacgaggccctttcaggaggcagcacctccgagggctttgaggacttcacaggtggg
gtcaccgaatggtacgagctgcggaaggcgcccagcgacctctacagcatcatcctcaag
gcgctggagcgaggctccctgctgggctgctccattgatatctccagcattctggatatg
gaggctgtcaccttcaagaagctagtgaagggccatgcctactctgtgaccggggccaag
caggtgaactaccagggccagatggtgaacctgatccggatgcggaacccctggggcgag
gtggagtggacaggagcctggagtgacggctccccggagtggaacaacgtagacccttat
gttcgggagcagctccgggtcaagatggaggacggggagttctggatgtccttccgagac
ttcatgcgtgagttcacccgcctggagatctgcaacctgacgcccgacacgctcaagagc
cagaggttccgcaactggaacaccaccctgtacgagggcacctggcggcgggggagcacc
gcggggggctgccgcaactacccagccaccttctgggtgaacccccagttcaagatccgg
ctggaggagacggatgacccggacgacgacgactataggagtcgggagtcaggctgcagc
ttcctgctcgccctcatgcagaagcaccgccgtagggagcgccgatttggccgcgacatg
gagaccataggcttcgctgtctacgaggtccctccggagctgatgggccggccggccgtg
cacctgaagcgggacttcttcctggccaacgcgtctcgggcccgctccgagcagttcatc
aacctgcgggaagtcagcacccgcttccgcctgccacccggggagtatgtggtggtgccg
tccaccttcgagcccaacaaggagggcgactttgtgctgcgtttcttctcagagaagagc
gctgggacccaagagctggatgaccagatccaggccaatctccctgacgagaaagtactc
tcagaagaggagattgatgagaacttcaaatccctcttcagacaactggcaggggaggac
atggagatcagcgtcaaggagctgcagaccatcctcaacaggatcatcggcaaacacaaa
gacctgcggaccaagggcttcagcctggagtcctgccgcagcatggtgaacctcatggac
cgtgacggcaacgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccgg
aattacctgtcaattttccggaagtttgacctggacaagtcgggcagcatgagtgcctac
gagatgcggatggccatcgagtctgcaggcttcaagctcaacaagaagctgtacgagctc
atcatcacccgctactcggaacccgacctggctgtggacttcgataacttcgtgtgctgc
ctagtgcggctggagaccatgttccggtttttcaagactctggacacggatctggatgga
gtcgtgacctttgacttgtttaagtggttacagctgaccatgttcgcatga
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