Phocoena phocoena (harbor porpoise): 136126319
Help
Entry
136126319 CDS
T11058
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04136
Autophagy - other
pphc04140
Autophagy - animal
pphc05010
Alzheimer disease
pphc05014
Amyotrophic lateral sclerosis
pphc05016
Huntington disease
pphc05017
Spinocerebellar ataxia
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136126319 (ATG2A)
04136 Autophagy - other
136126319 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
136126319 (ATG2A)
05014 Amyotrophic lateral sclerosis
136126319 (ATG2A)
05016 Huntington disease
136126319 (ATG2A)
05017 Spinocerebellar ataxia
136126319 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
136126319 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136126319 (ATG2A)
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136126319 (ATG2A)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
136126319 (ATG2A)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136126319 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
136126319
NCBI-ProteinID:
XP_065737447
LinkDB
All DBs
Position
8:complement(102696948..102717287)
Genome browser
AA seq
1938 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVVLRDIHLEIWSVN
EVLESMESPLELVEGFVGSIEVAVPWAALLTDHCTVHVSGLQLTLQPRQGPGPGAADSQS
WASCMTTSMQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
PPGAGERGVAVEAHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLAGVRLHFEELR
PQEGPPEPPLQIGSCSGCLELTVKLKQNEAFPGPKLEVCGQLGSLHLLLTPRQLQQLQEL
LGALSLADPEGLVDKLNKSRPLGADDLWLIEQDLNQQLQAGTVAEPLGSDPLSNPLVNLE
STDLFFSMAGLTSSVASALSELSLSDVDLGTSVHSNMASRQLSAQGPPTGKTAPAPPSNT
LRPDSLLKMTLGGVTLTLLQTSAPSSGPPDLTTHFFAEFDATKDGSFGSHDFYHLRPRFQ
RACPCSHVRLTGAAVQLSWELRTSRGRRITSTEVHFGQLEVLECLWPRGTPEPEYTEVLS
FPSGLRSQASVQPCAHLRHTQTLRRLPKSRPRRPTACHCHSELALDLADFQADVELGALD
RLAALLYQATTPPPEQPAGLLTEPPPAAEQHAVVRLSAPRATLQLRFPIADLRPERDPWV
GGAVRAEQLRLELTEPQFRSELSSGPGPPAPTRLELSCSDLHVTYEDGEKPPVPCLRVSK
ALDPKSPGHKYFLPQVVVTLNPQLGAQWEVTPEKGEELELSAENLCELREPEPSPFSSKR
TMYETEEMVIPGDPEEMRTFQSRALALSRCSLEVVLPGAHVFLPSKEVYESLYNRINNDL
LMWEPADLLPTPAPATRPSGFPDASGFWHDSFKMCKSAFKLGLLPTRLLDLPPDSDSDDE
DTHFSAGASGTPQRLAPESQSPHSQSTFSTLVTVLKGRITAHCETKDECGKRLEATHGEL
VLDVEQGTIFSVCQYRGQPGLGYFCLEAEKATLYHRAAVDDYLLPSRLELPTFAPPAQLA
RTIYPSEEGMTEQGGVGRKGQGRGPHMLSTAVRIQLDPHRNVKEFLVTLRLHRATLRHHM
ALPEQSWHSQLLEFLDVLDDPVLGYLPPTVITILHVHLFSCAVDYRPLYLPVRVLVTAET
FTLSSNIVMDTSTFLLRFILDDSALYLSDKCDMETLDLRRDYVCVLDVDLLELVIKTWKG
STEDKLSRPLFELRCSNSAMHVHSCADSCALLVSLLQYVTSEGDLHPPPRPPSPTEIAGQ
KLSESPASLPSCPPVETALINQRDLTDALLDTERSLRELAQASGGPFFQASPVSVYLFPG
ERSGAQPPSPLVGAPTGSLGSHSEAKEEEKEEEGDGDTLDSDEFCILDAPGLGILPQDGE
PVVTQLHPDPIIVQDGHFSQPLGSTDLLRAPAHFPVPSSRVVLREVSLVWHLYGGQDFGP
HPGHRARAGLTGPRSSPSRCSGPNRPQNSWRAQGGSGRQHHVLMEIQLSKVSFQHEVYPA
EPGPVAPGKEPEEQPLSRQVFIVQELEVRDRLASSQINKFLYLHTSERMPRRTHSNMLKI
KALHVAPVTNLGGPECCLRVSLLPLRLNVDQDALLFLRDFFTSLAASINPVVPAETSTEA
HPETPVQPSGPQEGQPEGVETTSSQEAAGGRHGASPAEQQPIYFREFRFTSEVPIWLDYH
GKHVTMDQVGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQ
LPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALEL
SNRLVQAIQATAETVYDILSPAAPISRSLQDKRSVRRLRKGQQPADLREGVAKAYDTVRE
GILDTAQTICEVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIL
PDAHKDHALKWRLDETRD
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctatggccgtggtcgaactgtgtgaaagagcgggtctgccgctacttg
ctgcaccactacttgggtcacttcttccaggagcacctcagcctggaccagctcagcctc
gatctgtacaagggcagcgttgtcctgcgggatatacacctggagatctggtctgtgaat
gaggtgctggagtccatggagtcgccactggagctggtggaaggcttcgtgggctctatc
gaggtggccgtgccctgggccgcgctgctcaccgaccactgcaccgtgcacgtgtcaggc
ctccagctcaccttacagccccgccagggcccggggccgggggctgccgactcacagagc
tgggcctcgtgcatgaccacgagcatgcagctggcccaggagtgcctgcgggatgggctg
cccgagccctctgagccaccacagcccctggaaggactggagatgtttgcccagaccatt
gagactgtactgcgaaggatcaaggtgaccttcctggatactgtcgtgagggtagagcac
ccgcccggtgctggggagcgtggcgtggcagtggaagcccacgtgcaaagactagagtac
tgcgacgaggccgtgcgagacccaagccaggcaccgcccgtggatgtgcaccagccccct
gccttcctccacaagctgctgcagctggcgggggtccgcctgcacttcgaggagctccgc
ccacaggaaggacccccagagcctcccttgcagattggcagctgctcagggtgcctggag
ctgacagtgaaattgaagcaaaatgaggccttcccaggccccaagctggaggtgtgtggg
cagctgggctccctgcacctgctcctgaccccacggcagctccagcagcttcaggaactg
cttggcgcactgagccttgcagaccccgagggcctggtcgacaagctgaacaagagccgc
ccactaggtgctgacgatctgtggctgattgaacaggatctgaaccagcagctgcaggcg
gggaccgtagctgagcccctcggctcagaccccctttcgaacccccttgtcaacttggag
agcactgacctcttcttctccatggcgggcctcacaagcagtgtggcctcagccctgtct
gagctctccctctccgatgtagacctgggcacctctgtgcacagcaacatggcctcccgc
cagctctctgctcagggccccccaaccggcaagacagcccctgcacccccctcgaacacc
ctgcgccctgactcgctgctgaagatgaccttggggggtgtgaccctgaccttgcttcag
acatctgccccgtcttccggaccacctgacctcaccacccacttttttgcggagttcgat
gccaccaaggatgggtccttcggctcccatgacttctaccatctccgaccgcgcttccag
agggcctgtccctgtagccatgtccggctaacgggtgccgctgtgcagctttcctgggag
ctgaggacaagcaggggccggcggattaccagcacggaagtgcacttcgggcagctcgag
gtgctggagtgtctgtggcccaggggtactccggagcctgagtacacagaggtcctgagc
ttccccagcggcctgcggtcccaggcctcggttcagccttgcgctcacctgcgccacacg
cagaccctgcgccggctgcccaagagccggccccggcgcccaactgcctgccattgtcac
tcagaactggccctggacctggccgacttccaggcagatgtggagctgggggccctggac
cggctcgctgccctgctgtaccaggccaccacaccccctcccgagcagccggctggcctg
ctgacagagcccccgccagcagctgagcagcatgcagtggtgcggctctcggcaccccgg
gccacactgcagctgcgcttccccattgctgacctgcggcctgagcgggacccctgggtg
ggcggggccgtgcgggccgagcagctgcgcctggagctgactgagccccagttccggtca
gagctgagcagtgggcctggccccccagcccccacccgcctggaactctcctgctccgac
ctccatgtcacctacgaagacggagagaagccacctgtcccctgcctgcgggtctccaaa
gccctggatcccaagagccctgggcacaagtacttcctgccccaggtagtggtgaccctg
aacccccagctcggcgcacagtgggaagtgaccccggagaaaggagaggagctggagttg
tcggccgagaatctgtgcgagcttcgggagcctgagccctcacccttctcctccaaaagg
accatgtacgagacggaagagatggtgattcctggagaccctgaggaaatgaggaccttt
cagagccgggccctggcgctgtcccgctgcagcctggaagtggtcctgcccggcgcccac
gtcttcctgcccagcaaggaggtctacgagagcctctacaacaggatcaacaacgacctg
ctcatgtgggagcccgcggacctgcttcccacccccgcccctgccactcgcccctctggc
ttcccagatgcctcgggcttctggcacgacagcttcaagatgtgcaagtctgccttcaag
ctgggtctccttcccactcggctccttgatctccccccagactcggactcggacgacgag
gacacccacttctcagcgggggcatcaggcactccccagcgccttgcccctgagtcccag
agccctcactcccagagtaccttctctacactggtgacggtgctaaagggtcggatcacg
gcccactgtgagaccaaggacgagtgcgggaagcggctggaggccacgcacggggagctg
gtgctggacgtggaacaaggcaccatcttcagcgtctgccagtaccgaggccagccggga
ctcggctacttctgcctggaagctgaaaaggcgacactgtaccaccgagcggctgtggat
gactacctgctgcccagtcgcctggagctgcccacctttgctcctccggcccagctggcc
cgaaccatctacccgtcggaggaagggatgactgagcaaggaggcgtgggccgcaaaggc
cagggccggggcccccacatgctgtccaccgcggtacgcatccaactggaccctcacagg
aacgtcaaggagttcctggtgacactgcggctgcacagagccaccctgcgccaccacatg
gccctgccagaacagagctggcactcccagctgttggagttcttagatgtcctggatgac
ccagtgctgggctacctgcctccaacggtcattaccatcctacatgtacacctgttctcc
tgtgccgtggactacaggcccctctacctccctgtacgtgtccttgtcactgctgagacc
ttcaccctctccagcaacatcgtcatggacacctctaccttcctgctcaggttcatcctc
gacgactccgccttgtacctgtccgacaagtgtgacatggagaccctggatctgcggcga
gattatgtctgtgtcttggacgttgaccttctggagctcgtgatcaaaacctggaagggg
agcactgaggacaaactgagccggccactcttcgagctgcgctgctccaacagtgcaatg
cacgtgcatagctgtgctgactcctgcgccctgctggtcagcctgctccagtacgtgacg
agtgagggcgacctgcacccccctccccggccccccagccccacggagatcgccggccag
aagctctcggagagccctgcctccctgccctcatgccccccagtggagacagccctcatc
aaccagcgggacctgaccgacgccctcctggacacggagcgcagcctgcgggagctggcc
caggcttcaggtggccccttctttcaggcctctccagtgtcggtctacctattcccaggt
gaacggagtggggcccagcccccctcgcccctggttggggcccccactggcagcttgggg
tcccactcagaggccaaagaagaggagaaggaagaggagggggatggagacactctggac
agcgatgagttttgcatccttgacgctcctggcctgggcatattgccccaagatggggag
cctgtggtgacacagctgcatccagaccccatcatagtgcaggacgggcacttctcacag
ccgctgggcagcacggacctgctgcgggcacctgcccactttccagtgcccagcagtcgt
gtggtgctgcgtgaggtctcccttgtctggcacctctatgggggccaagactttggcccc
catcccggacacagggcaagagcaggcctcacaggccccaggagctccccttctcgctgc
tccggccccaaccggccccagaactcctggcgtgcgcaggggggcagtggcaggcagcac
cacgtcctcatggagatccagctcagcaaggtgagcttccagcatgaggtgtacccggca
gagccaggccccgtagcccccggcaaggagcccgaggagcagccgctgtcccgccaggtg
ttcatcgtgcaggagctcgaggtccgagaccggctggcctcctcccagatcaacaaattc
ctgtatttacacacgagtgagcggatgccacggcgcacccactccaacatgctcaagatc
aaagcgctgcacgtggcccccgtgaccaacctgggtgggcccgagtgctgtctccgcgtc
tcactgctacccctgcggctcaacgtggatcaggatgctctgctcttcctcagggatttc
ttcaccagcctggcggccagcatcaaccctgtggtcccggcggagacctccactgaagct
caccctgagaccccagtccagcccagcggcccccaggaagggcaacccgagggtgtggag
accaccagctcccaggaggctgcaggcggtagacacggcgcctcccctgctgagcagcag
cccatctacttcagggagttccgcttcacgtccgaggtgcccatctggctggattaccac
ggcaagcacgtcaccatggaccaggtgggcactttcgcaggcctcctcataggcctggcc
cagctcaactgctccgagctgaagctaaagcggctgtgttgccggcatgggctcctgggt
gtggacaaggtgctgggctatgctctcaacgagtggctgcaggacatccgaaagaaccag
ttgcctggcttgctggggggcgtgggccccatgcactctgttgtccagctcttccaaggg
ttccgggacctgctgtggctgcccatcgagcaatacaggaaggatgggcgcctcatgcgg
gggctgcagcggggggctgcctccttcggctcatccacagcttcagccgccttagaactc
agcaaccggctggtgcaggctatccaggccacagccgagacggtgtacgacatcctgtcc
ccggcagcgcccatctcgcgctccctgcaggacaagcgctctgtgcgaaggctgcggaag
ggccagcagccggctgaccttcgggagggtgtggccaaggcctacgacacagttcgagag
ggcatcctggacacagctcagaccatctgcgaggtggcgtctcggggccatgaacagaag
gggctgacaggtgctgtggggggcgtgatccgccagctgcccccaacggtggtgaagccc
ctcatcctagccacagaggccacgtccagcctcctgggggggatgcgcaaccagatcctc
cctgatgcgcacaaggaccacgctctcaagtggcgtttggacgagacccgggactga
DBGET
integrated database retrieval system
