Phocoena phocoena (harbor porpoise): 136126461
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Entry
136126461 CDS
T11058
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
136126461 (SHANK2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_5
Ank_4
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
136126461
NCBI-ProteinID:
XP_065737683
LinkDB
All DBs
Position
8:complement(106884631..107340950)
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AA seq
1848 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDSSEESDSDSSKEETIYDTIRATAEKPGGARAEESQGNTLVLR
IIIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASDGRDGKFLDEER
LLRAYPQPAGRGIPSLEFRYKKRVYRQSNLDEKQLAKLHTKSNLKKCMDYIQHRSVEKVV
KMLERGLDPNFHDLETGETPLTLAAQLDDPVEVIKALRNGGAHLDFRAKDGMTALHKAAR
ARSLPALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHERAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGNKDLK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPSTLAAPRVLLRS
NSDNNLNASAPDWAVRSAGPHRSLSPQLPQQMPSRPDGAVKTLGSYTSGPRSRSPSLNRL
GGTGEDGKRPWQPWHVGPAFLPGVSKDALSAFEYPGPKRKLYSAVPGRLFVVVKPYQPQV
DGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKESQAETRADRSKK
LFRHYTVGSYDSFDASSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPA
LQYLESVDEGGVAWQAGLRTGDFLIEVNDENVVKVGHRQVVNMIRQGGNHLVLKVVTVTR
NLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPDEIVPASKP
SRTAESVAVESRVATIKQRPTSRCFPSVSDVNSVYERQGIAVMTPTVPGSPKGPFLGLPR
GTMRRQKSIDSRIFLSGLTGEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPP
SPTAYNCPKSPTPRVYGTIKPAFNQNSAAKVSPAARSDTVATMLREKGLYHRRELDRYSL
DSEDLYSRNAAAQATFRGKRGQMPENPYSEVGKVASKAVYVPAKPARRKGMLVKQSNVED
SPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSTEIEPQASEQPGQLRPDDSLTASSPFAAA
IAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGLPAPQARPSKFPEEGGFGEEDGTEQL
SSPTPGAATREPENHFVGGGEAGAQGEAGRPLNSTSKAKGPESSPAAPLKSSSAAGPENY
VHPLTGRLLDPSSPLALALSARDRALKESQQGPKGEAPKADLNKPLYIDTKMRPSGEAGF
PPVSRQNTRGPLRRQETENKYEADLGKERKGDEKGTLTNIADASQRKSAGLLMVHTVDAA
RPDAFLQEEDEDADTETKPDRSPSEVPEGVPETEGALPIPAGPEPAAAAPGRTVVAAGSV
EEAVILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRVASVPALSDLVTQK
KSDAPQSPSSNSSQPTNSADSKKPAGLSNCLPASFLPPPESFDAVTDSGIEEADSRSSSD
HHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQAFTVDKPPVPPKPKMKPIIHKGNA
LYHDALLEEDVDSFVIPLPARPPPPGGAQPGTTKVIQPRTSRLWGDISEVKSPILSGPKA
NVISELNSILQQMNREKTAKPGEGLDSPAGSKPASLAPRGPEVMSTVSGTRSTTVTFTVR
PGTSQPITLQSRPPDYESRTSGPRRAPSPVVSPTELNKEILPAPLSAAAAAPSPTLSDVF
GLPSQPPPGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLG
EHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagcccgacgtccagcgaggacgagatggcccagagcttctccgactcttcg
gaggaatcagactcggacagctccaaggaagagaccatctacgacaccatccgggccaca
gcggagaagccgggcggcgccagggcggaggagagccagggcaacaccctggtgctgcga
atcatcatcgaggacctgcagcagacgaagtgcattcgatttaacccagatgcgacggtg
tgggttgcgaagcagcggattctgtgctcgttgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggcgagcgacgggcgagacggcaagttcttggatgaggaacgg
cttctgcgcgcgtacccgcagcccgcgggcaggggcatcccctccctggagtttcgctac
aagaagcgggtgtatagacaatccaatctggatgagaaacagttggccaagctgcatacg
aagagcaacctgaaaaaatgcatggattacatccagcatcgttcagtggagaaggtcgtc
aagatgctggaacgaggcctggacccgaatttccatgacctggagacgggagagactccc
ctgaccctagccgcgcagctggacgaccccgtggaggtgatcaaagctctccgaaacggc
ggggcccacctggacttccgcgccaaagacgggatgacggccctgcacaaagccgcccgc
gccaggagcctgccggctctgaagaccctcttggagcttggagcatccccggattacaag
gacagctacggtctcacgccgctgtatcacactgcggtggtcgggggcgacccctgctgc
tgcgagctgctgctgcacgagcgcgcggccgtgagctgcaaggacgagaacggctggcac
gagatccaccaggcctgcaggtacggacacgtgcagcacctggagcacctgctcttctac
ggggctgacatgggggcccagaacgcctcggggaacactgccctgcacatctgcgccctc
tacaaccaggacagctgtgcgcgcgtgctgctgtttcggggtggaaataaggacttgaag
aactacaacagccagaccccattccaggtggcgatcatagccggtaacttcgagctggct
gagtacatcaagaaccacaaggaaaccgacatcgtgcccttccgagaggccccggcgtac
tccaaccgaaggcgacggccccccagcacactggccgccccccgggtcctgctgcgttcc
aacagcgacaacaacctcaatgccagcgcgcctgactgggccgtccgctcggccggcccc
caccgcagcctctcgccccagctgccgcagcagatgcccagcaggcccgacggggccgtg
aagacccttgggagctacacctccgggccccgcagccgatccccctcgctcaacaggctg
ggcggcaccggcgaggacggcaagaggccctggcagccctggcacgtcggtccggctttc
ctgccaggcgtcagcaaggatgcgctttcggccttcgagtacccggggcccaagcggaag
ctgtacagcgcggtgcccgggaggctcttcgttgtcgtcaagccataccagccccaggtc
gatggtgagatcccccttcaccgtggcgacagggtcaaagttctgagcatcggcgaaggg
ggcttctgggaaggcagcgcccgcggccacatcggatggttcccagccgagtgtgtggag
gaggtccagtgcaagcccaaggagagccaggcagaaactcgtgcagaccgcagcaagaaa
ctcttccggcactacacggtcggctcttatgacagctttgatgcttccagtgactgcatc
atcgaggagaagaccgtggtcctgcagaagaaagacaatgagggcttcggatttgtgctc
cgcggggcgaaagcggatacgcccatcgaagagttcacgccaacgccagcgttcccagcc
ctgcagtacctggagtccgtggatgaaggtggggtggcatggcaagctggactgaggact
ggggacttcttgattgaggttaacgacgagaatgtcgtgaaggtcggccaccggcaggtg
gtgaacatgatccgccagggtgggaatcacctcgtcctcaaggtggtcacagtgaccagg
aatctcgacccagacgacacggccaggaagaaagctcctccacccccgaagcgcgccccg
accacggccctcacgctgcgctccaagtccatgacctcggagctggaggagctcgtggat
aaagcctccgtccggaagaagaaggataaacccgatgagatagtcccagcctccaagcca
tcccgaactgctgagagcgtggcagtggagtccagggtggccaccatcaagcagcggccc
accagccggtgcttcccctctgtctcggacgtgaactccgtgtacgaacgccaggggatc
gccgtgatgacgcccaccgttcctgggagcccgaaaggcccatttctgggcctccctcga
ggtacgatgcgaaggcaaaaatcaatagacagcagaatctttctatcaggactcacgggg
gaagagcggcaatttctggcccctccgatgctcaagttcaccagaagcctgtccatgccg
gacacctccgaggacatccccccgccgccacagtcggtgcccccctctcctccaccaccc
tcccccaccgcctacaactgccccaagtccccaactcccagagtctacgggacgatcaag
cccgcgttcaatcagaactccgccgccaaggtgtccccggcagctcgctccgacacggtg
gccaccatgttgagggagaaggggctgtaccacaggagggagctggaccgctactccctg
gactccgaggacctctacagccgcaacgccgccgcccaggccaccttccgcggcaagagg
ggccagatgcccgaaaacccgtactccgaggtcgggaaggtcgccagcaaagccgtctac
gtccccgccaagcccgccaggcggaagggcatgctggtgaagcagtccaacgtggaggac
agccccgagaagacgtgctccatccccatcccgaccatcatcgtcaaggagccctccacc
agcagcagcggcaagagcagccagggcagcagcacggagatcgagccccaggcctccgag
cagccgggccagctgcggcccgacgacagcctgaccgccagcagccccttcgccgccgcc
atcgccggggccgtccgcgaccgggagaagcggctggaggccaggaggaactcgccggcc
ttcctgtccacggacctgggggacgaggacgtgggcctggggctgcccgccccccaggca
cggccctccaagttccccgaggagggcgggttcggcgaggaggacggcaccgagcagctg
tcgtcacccacgccaggggcggcgaccagggagcccgagaaccactttgtgggtggtggc
gaggccggagctcagggtgaggccggcaggccactgaattccacgtccaaagccaagggg
cccgagagcagccctgcagctcccctcaagagcagcagtgcggccggccctgagaattac
gtccacccgctcacggggaggctgctggacccgagctccccactggccctggcgctctcc
gcgagggaccgagccttgaaggagtcccagcagggccccaagggggaggcccccaaggcc
gacctcaacaaacctctctacatcgataccaaaatgcggcccagcggggaagcaggcttc
cctccggtctccaggcagaacacgcgggggcccctgaggcggcaggagacggagaacaag
tacgaggccgacctgggcaaggagcggaagggcgacgagaagggcacgctcaccaacatc
gcggatgcgtcccagcgcaagtcggccggcctgctgatggtacacaccgtggatgcagcc
aggccggacgccttcctgcaggaagaggacgaggatgccgacacagaaacgaagccggac
cgctcgccgtccgaggtgccagaaggtgttcccgaaactgaaggtgctttaccgatcccc
gctggccccgagcccgcggccgccgcgcccggcaggaccgtcgtggcggcgggctccgtg
gaggaggcggtgatcttgccgttccgcatccctcccccacctctggcatccgtggatctg
gatgaggattttatttttacagagccactgcctcctcccctggaatttgcaaacagtttt
gatatccccgatgaccgcgttgcttctgtccccgcactctcagacctggtcacgcagaag
aaaagcgacgccccccagtccccttcgtcgaactccagccagcccaccaactctgcggac
agtaagaagccagctggcctttcgaactgtctgcctgcctcattcctgccaccccccgaa
agctttgatgccgtcacggactctgggatcgaggaggcggacagccggagcagcagcgac
caccacctcgagacgaccagcaccatctccacggtctccagcatctccaccctgtcctcc
gagggcggggagaacgtggacacctgcacagtctatgcagatgggcaagcatttacggtt
gacaaacccccagtacctcctaagccaaaaatgaagcccataattcacaaaggcaacgca
ctttaccacgacgcgctgctggaggaggacgtggacagctttgtgatccccctgccggca
cgcccgccgccccccggcggggcccagcccgggaccacaaaggttatccagccgaggacc
tccaggctgtggggtgacatctcggaggtcaaaagcccgattctctccggcccaaaggca
aacgtgattagtgagttgaactcaatcctgcagcaaatgaaccgagagaaaacggcaaag
ccgggggaaggactggactcgccagcgggatccaagcctgccagcctcgctccaagaggc
ccagaggtcatgagcaccgtctcaggtacgcggagcacgacggtcaccttcacggttcgc
cctgggacctcccagcccatcaccctgcagagccggcccccagactatgagagcaggacc
tcaggaccaagacgtgcccccagccccgtggtctcgcccacagagctgaacaaagagatc
ctgcctgcgcccctgtccgctgccgccgcggctccctctcccaccctctcggatgtcttc
ggcctcccaagccagccccctcccggggacctgtttggcttgaacccagcgggacgcagc
aggtcgccatccccctccatactgcaacagccaatctccaataagccttttacaactaaa
cctgtccacctgtggactaaaccagacgtggcggactggctggaaagcctcaacctgggt
gagcataaagaggccttcatggacaacgagatcgacggcagccacctgccaaacctccag
aaggaagacctcatagatctgggcgtgacgcgcgtcgggcacaggatgaacatcgaaagg
gctttgaaacagctgctggacagataa
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