Phocoena phocoena (harbor porpoise): 136126565
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Entry
136126565 CDS
T11058
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136126565 (CTR9)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
136126565 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
136126565
NCBI-ProteinID:
XP_065737869
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All DBs
Position
8:65302384..65327123
Genome browser
AA seq
1176 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGSGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEEEEGGERKKKKR
RRPPKGDEGSDDDETENGPKPKKRRLPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSDSDSDEGQRRKTGASSEESDSDENQNKSGSEAGSPRRPRRQHS
DEDSDSDQPARNLRPSGSEQSDNESLQSGRSRSGGSEMDSQPASPSAESDHYSERASDNE
GSGRGSGRGSGNESEPEGSNNEASDQGSERGSDDSD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccattgagattcccctccgggacactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaaacaggaacacacacaa
ttgcacatatggattgctttggcgctggaatactacaagcaaggaaaaacagaagagttt
gtaaagttgttggaagcagcgcgtatagatggcaatttggactatagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcctattatgtacaacaggctcggaaggag
aagaataaggacaacaagaaagatcttattacacaggcaaccctattgtatacgatggca
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctactt
gaaggtgacaaaatggatcaggctgatgcacaatttcatttcgtactcaaccagtctcca
aataatattccagcccttcttggtaaagcttgcatttcattcaacaagaaggattacaga
ggagctctcgcttactataagaaagccttgcgaactaacccaggatgtccagcggaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaattggagaaggctcgtctggca
ttcagcagagccctggaactcaattccaagtgtgtgggagcattggtgggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtccaacttctttccaga
gcctatactattgatcctagcaaccctatggtattgaaccacttggcaaatcactttttc
ttcaaaaaggattacagtaaagtccagcacttggctctccacgcattccataatacagaa
gtggaggccatgcaagcagaaagttgctatcagttggctagatcattccacgtccaggaa
gattatgaccaagctttccagtactactatcaagccacacagtttgcctcatcctctttt
gtgctgcctttttttggtttgggacaaatgtacatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagtcttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctatatgccgcctcagaagaccaagaaaaacgagatatcgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgacgttgaagcttggattgagttggcacaa
atcttagaacagaccgacatacagggtgccctgtcagcctatggaacagcgacacggatc
cttcaggagaaagtgcaggccgatgtccccccagagattctgaataacgtgggtgccctc
catttcaggcttggaaatctgggagaggcaaagaaatactttttggcatcattggatcgt
gccaaggcagaagctgagcatgatgaacattattacaatgccatttctgttacaacatca
tacaatttagccaggctgtatgaggcgatgtgtgaattccatgaagcagaaaaactatat
aaaaacatcttacgggaacatcctaattatgttgactgctatctgcgcctaggagccatg
gctagagataaaggaaatttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggaccatccggatgcttggtctttgattggtaatcttcatttggcaaaacaagaa
tggggtccaggccagaagaaattcgagaggatattaaaacaaccagctactcagagtgac
acttattctatgctggcccttggcaacgtctggctccaaactttgcatcagcccacccga
gacagagaaaaggaaaagcgtcatcaagatcgtgctctggccatctacaaacaagtactc
agaaatgatgcaaagaatctgtatgctgctaatggcataggagctgttttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatc
agtgatgtgtggttgaacctagcacacatctatgtggaacaaaagcaatatatcagcgcc
gttcagatgtatgaaaactgcctcagaaagttctataagcaccagaacactgaagttgtc
ctctatttggcccgggctctcttcaagtgtggcaagttacaggaatgcaaacagactctg
ctgaaggctagacacgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctgcaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactc
aatgctgtgaaagaactggagcttgcacacagatatttcagttacttgagtaaagttgga
gataaaatgagatttgatttggccctcgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtaccacgtggccagggcgcgcaaacaggacgaagaagaaagggaa
ttgcgggccaaacaagaacaagagaaagaactgttaaggcagaaacttctcaaagaacag
gaagagaaacgtctcagagaaaaagaagagcaaaagaaacttttggaacagcgggcccag
tacgtagagaagaccaaaaatattcttatgtttactggagagactgaagcgacaaaagaa
aagaaaagaggtggcagtggtggacggcggtccaagaagggaggagagtttgatgagttt
gtcaacgatgacaccgatgatgacctgcctatatccaaaaagaagaagagaaggaagggc
agtggtagtgagcaagaaggcgaggaggaggagggtggcgaaagaaagaagaagaagagg
agaagacctccgaagggagatgaaggatctgatgatgatgaaacagaaaatggccccaaa
ccgaaaaagcgccgtctaccaagagcagagaagaagaaggctcccaagccagaacgtctg
cctccttcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgacgattca
tctgatgaagataaactgaaaattgctgatgaaggacatccccgcaacagcgacagcgac
tccgatgagggccagcggcggaagacgggcgcctcctcggaggagagcgactccgacgag
aaccagaacaagtccggcagcgaggccggcagcccccggcggccccggaggcagcactca
gatgaggactcagacagcgaccagccggccagaaatctcaggccctcgggctccgaacag
tctgacaacgaatccctgcagtccgggcggagccgctcggggggctctgagatggactct
cagcccgcgtcccccagcgccgagtcggaccactactccgagagagcatctgacaacgag
gggtccggccgaggctccggcagaggctccggcaatgaatccgaacccgagggatccaac
aacgaggcctcggatcagggctcagaacgtggttcagatgatagcgactag
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integrated database retrieval system
