Phocoena phocoena (harbor porpoise): 136126570
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Entry
136126570 CDS
T11058
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04710
Circadian rhythm
pphc04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
136126570 (BMAL1)
09159 Environmental adaptation
04710 Circadian rhythm
136126570 (BMAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136126570 (BMAL1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
136126570 (BMAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
136126570
NCBI-ProteinID:
XP_065737875
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Position
8:67701601..67805617
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AA seq
633 aa
AA seq
DB search
MAEQRMDISSTISDFMSPGATDLLSSPLGTGGTDCNRKRKGSSTDYQLDGFSFEESMDTD
KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDSEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPSFPQPTASPRSMDSTLPSGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS
SPGGKKILNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagagaatggacatttcttcaactatcagcgacttcatgtccccaggtgcc
accgacctcctctccagccccctgggcaccggtggcacggattgcaaccggaaacgcaag
ggcagctccacggactaccaactagatggcttttcttttgaagaaagcatggacacagac
aaagatgaccctcatggaaggttagaatacacagagcaccaaggaaggatcaaaaatgca
agggaagctcacagccagattgaaaagaggcgtcgggataaaatgaacagttttattgat
gaactggcttctttggtaccaacgtgcaatgcgatgtccaggaaattagacaaacttact
gtgctgaggatggcggttcagcacatgaaaacattacgaggtgccaccaatccatacaca
gaagcaaactacaaaccgacttttctatcagatgatgaattgaaacaccttattctcagg
gcagcagatggatttttgtttgtcgtaggatgtgaccgagggaagatcctctttgtgtca
gagtctgtcttcaagatcctcaactacagccagaatgatctgattggtcagagtttattt
gactacctgcatcctaaagatatcgccaaagtcaaggagcagctctcctcctctgacact
gcaccccgggagcggctcatagatgcaaaaactggacttccagttaaaacagatataacc
cctgggccatctcgattatgttctggagcacggcgttctttcttctgtaggatgaagtgt
aacaggccttccgtaaaggttgaagacaaggatttcccctccacctgctcaaagaaaaaa
gcagatcgaaaaagcttctgcacgatccacagcacaggctatctgaaaagttggccgccc
acaaagatggggctggacgaagacagcgaaccagacaacgaggggtgcaatctcagctgc
cttgtcgccatcggacgactgcactctcacatggttccacaaccggcgaacggggaaatc
agggtgaaatctatggaatatgtctctcggcatgcaatagatgggaagtttgttttcgta
gaccagagggcaacagctattttggcatatttaccacaagaacttctaggcacctcatgt
tatgaatattttcaccaagatgacataggacatctcgcagaatgtcataggcaagtttta
cagacaagagaaaagattacaactaattgctataagtttaaaatcaaagatggttctttc
atcacgctgcggagccggtggttcagtttcatgaacccttggaccaaggaagtagagtac
atcgtctccaccaacaccgttgttctagccaacgtcctggaaggcggggacccaagcttc
cctcagcccacagcatccccccgcagcatggacagcacgctgccctctggagaaggtggc
ccaaagaggacccaccccactgttccagggattccagggggaaccagggctggggcagga
aaaataggtcgaatgattgctgaggaaatcatggaaatccacaggataagagggtcatcg
ccttccagctgtggctccagcccattgaacatcacaagtacacctccccctgatgcctct
tctccaggaggcaagaagattttaaatggagggactccagacattccttccagcggccta
ctaccagggcaggctcaggagaacccaggttatccatattctgatagctcttctattctt
ggtgagaaccctcacataggcatagatatgatagacaatgatcaaggctcaagcagtccc
agtaatgatgaagcagcaatggctgtcataatgagcctcttggaagcagatgctgggctc
ggtggtcctgttgactttagcgacttgccatggccgctgtaa
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